Jatropha Genome Database

JcCA0036251.10 (JcS_100034.60)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0036251
Scaffold:
JcS_100034 JcCB0189361(+) =JcCA0199801(-) =JcCB0216831(+) =JcCA0149441(-) =JcCA0036251(+) =JcCA0047351(-) =JcCA0076481(-) =JcCB0268591(-) =JcCB0646891(-) =JcCA0075411(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9R985_RICCO 172 80.4 93.8 (tr|B9R985) Protein HVA22, putative OS=Ricinus communis GN=RCOM_1514800 PE=4 SV=1
Arabidopsis_pep AT1G74520.1 142 75.6 91.5 | Symbols: ATHVA22A | ATHVA22A | chr1:28008109-28009156 REVERSE
soybean_pep Glyma17g10730.1 145 74.7 86.8  
Medicago_pep IMGA|Medtr8g112530.1 147 73.4 83.0 TB2/DP1 and HVA22 related protein chr08_pseudomolecule_IMGAG_V3 25283646-25281645 E EGN_Mt090430 20090702
grape_pep GSVIVT01008026001 155 74.2 86.6  
castor_bean_cds 30147.m014111 280 89.2 89.2 Protein HVA22, putative
castor_bean_pep 30147.m014111 172 80.4 93.8 Protein HVA22, putative
JAT_13201ests gi|268521902|gb|FM892742.1|FM892742 494 100.0 100.0 FM892742 Jatropha curcas embryo 56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_003368, mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0036251.10 length: 160 aa.
IPR004345 TB2/DP1/HVA22 related protein
method AccNumber shortName E-value location
HMMPanther PTHR12300 HVA22-LIKE 3.7e-22 54-107
HMMPfam PF03134 TB2_DP1_HVA22 3.4e-09 51-88
no_ID  
HMMPanther PTHR12300:SF11 HVA22-LIKE 3.7e-22 54-107