Jatropha Genome Database

JcCA0029821.20 (JcS_101460.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0029821
Scaffold:
JcS_101460 JcCD0116228(-) =JcCB0333201(-) =JcCA0262281(-) =JcCA0029821(-) =JcCA0072591(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SRR4_RICCO 182 78.1 88.6 (tr|B9SRR4) Thioredoxin H-type, putative OS=Ricinus communis GN=RCOM_1058730 PE=4 SV=1
Arabidopsis_pep AT3G08710.2 164 68.5 83.3 | Symbols: ATH9 | ATH9 (thioredoxin H-type 9) | chr3:2645590-2646304 FORWARD
soybean_pep Glyma03g00410.2 165 67.9 80.7  
Medicago_pep IMGA|Medtr8g116230.1 164 69.5 81.9 Thioredoxin domain 2; chr08_pseudomolecule_IMGAG_V3 26291320-26294959 F EGN_Mt090430 20090702
grape_pep GSVIVT01025873001 154 72.2 82.5  
castor_bean_cds 29915.m000489 349 88.9 88.9 Thioredoxin H-type, putative
castor_bean_pep 29915.m000489 182 78.1 88.6 Thioredoxin H-type, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0029821.20 length: 116 aa.
IPR006662 Thioredoxin-like subdomain
method AccNumber shortName E-value location
Biological Process GO:0045454 cell redox homeostasis    
FPrintScan PR00421 THIOREDOXIN 2.8e-05 41-49
49-58
88-99
IPR012335 Thioredoxin fold
Gene3D G3DSA:3.40.30.10 no description 6e-23 1-114
IPR012336 Thioredoxin-like fold
superfamily SSF52833 Thioredoxin-like 1.1e-23 15-98
IPR013766 Thioredoxin domain
Biological Process GO:0045454 cell redox homeostasis    
HMMPfam PF00085 Thioredoxin 1.5e-22 20-110
IPR015467 Thioredoxin, core
Biological Process GO:0045454 cell redox homeostasis    
HMMPanther PTHR10438 THIOREDOXIN-RELATED 1.1e-34 31-109
IPR017936 Thioredoxin-like
Biological Process GO:0045454 cell redox homeostasis    
ProfileScan PS51352 THIOREDOXIN_2 11.019 1-116
IPR017937 Thioredoxin, conserved site
Biological Process GO:0045454 cell redox homeostasis    
PatternScan PS00194 THIOREDOXIN_1 NA 42-60
no_ID  
HMMPanther PTHR10438:SF16 THIOREDOXIN 1.1e-34 31-109