Jatropha Genome Database

JcCA0029821.10 (JcS_101460.50)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0029821
Scaffold:
JcS_101460 JcCD0116228(-) =JcCB0333201(-) =JcCA0262281(-) =JcCA0029821(-) =JcCA0072591(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9HDK6_POPTR 309 98.6 99.3 (tr|B9HDK6) Ubiquitin carrier protein OS=Populus trichocarpa GN=POPTRDRAFT_561006 PE=3 SV=1
Arabidopsis_pep AT1G64230.2 305 97.3 100.0 | Symbols: UBC28 | ubiquitin-conjugating enzyme, putative | chr1:23833792-23835220 FORWARD
soybean_pep Glyma18g44850.1 307 99.3 99.3  
Medicago_pep IMGA|Medtr3g083600.1 304 98.0 98.6 Ubiquitin-conjugating enzyme, E2 chr03_pseudomolecule_IMGAG_V3 19686456-19683283 F EGN_Mt090430 20090702
grape_pep GSVIVT01024546001 304 98.0 99.3  
castor_bean_cds 29915.m000490 428 92.8 92.8 ubiquitin-conjugating enzyme E2, putative
castor_bean_pep 28049.m000299 305 99.3 99.3 ubiquitin-conjugating enzyme E2, putative
JAT_13201ests gi|237679856|gb|GO247161.1|GO247161 791 99.8 99.8 JcrME_RL0705 Expressed sequence tags from Jatropha curcas root cDNA library Jatropha curcas cDNA, mRNA sequence
KJC_r1 KJC_c00222 886 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0029821.10 length: 148 aa.
IPR000608 Ubiquitin-conjugating enzyme, E2
method AccNumber shortName E-value location
Molecular Function GO:0019787 small conjugating protein ligase activity    
Biological Process GO:0043687 post-translational protein modification    
Biological Process GO:0051246 regulation of protein metabolic process    
HMMPfam PF00179 UQ_con 5.2e-53 5-141
HMMSmart SM00212 no description 9.7e-81 4-147
PatternScan PS00183 UBIQUITIN_CONJUGAT_1 NA 74-89
ProfileScan PS50127 UBIQUITIN_CONJUGAT_2 48.783 4-136
IPR016135 Ubiquitin-conjugating enzyme/RWD-like
Gene3D G3DSA:3.10.110.10 no description 1.1e-60 1-148
superfamily SSF54495 UBC-like 2.1e-68 2-148
no_ID  
HMMPanther PTHR11621 UBIQUITIN-CONJUGATING 2.8e-109 2-145
HMMPanther PTHR11621:SF29 UBIQUITIN-CONJUGATING 2.8e-109 2-145