Jatropha Genome Database

JcCA0029721.10 (JcS_200473.60)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0029721
Scaffold:
JcS_200473 JcCA0296141(+) =JcCA0029581(+) =JcCA0029721(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9HQ02_POPTR 663 78.6 82.6 (tr|B9HQ02) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1085955 PE=3 SV=1
Arabidopsis_pep AT1G08320.3 471 59.2 70.1 | Symbols: | bZIP family transcription factor | chr1:2622113-2627451 REVERSE
soybean_pep Glyma12g30990.1 541 67.4 74.5  
Medicago_pep IMGA|Medtr4g070060.1 471 59.0 68.7 bZIP transcription factor, bZIP_1 chr04_pseudomolecule_IMGAG_V3 13513585-13522990 E EGN_Mt090430 20090702
grape_pep GSVIVT01036134001 595 71.1 77.1  
castor_bean_cds 30055.m001550 894 87.9 87.9 DNA binding protein, putative
castor_bean_pep 30055.m001550 531 68.9 72.4 DNA binding protein, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0029721.10 length: 453 aa.
IPR004827 Basic-leucine zipper (bZIP) transcription factor
method AccNumber shortName E-value location
Molecular Function GO:0003700 transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMSmart SM00338 no description 5.4e-06 192-256
PatternScan PS00036 BZIP_BASIC NA 200-215
ProfileScan PS50217 BZIP 9.186 195-239
IPR011616 bZIP transcription factor, bZIP-1
Molecular Function GO:0003700 transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
Molecular Function GO:0046983 protein dimerization activity    
HMMPfam PF00170 bZIP_1 4.2e-08 196-237
no_ID  
Coil coil coiled-coil NA 216-244
Seg seg seg NA 142-155
244-255
369-381