| JcS_100397 | JcCA0132491(-) =JcCA0147251(+) =JcCA0029371(-) =JcPR13H21R2(-) =JcCB0053361(-) =JcCA0207751(-) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | B9SKI8_RICCO | 832 | 93.9 | 95.8 | (tr|B9SKI8) Retinoblastoma-binding protein, putative OS=Ricinus communis GN=RCOM_0659080 PE=4 SV=1 |
| Arabidopsis_pep | AT5G58230.1 | 793 | 88.4 | 93.2 | | Symbols: MSI1, MEE70, ATMSI1 | MSI1 (MULTICOPY SUPRESSOR OF IRA1); protein binding | chr5:23556112-23557994 FORWARD |
| soybean_pep | Glyma08g09090.1 | 802 | 90.3 | 94.1 | |
| Medicago_pep | IMGA|Medtr4g165720.1 | 773 | 88.5 | 93.8 | WD-40 repeat-containing protein MSI1, putative chr04_pseudomolecule_IMGAG_V3 41805235-41809409 E EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01013978001 | 681 | 93.0 | 96.8 | |
| castor_bean_cds | 29709.m001222 | 1382 | 88.8 | 88.8 | retinoblastoma-binding protein, putative |
| castor_bean_pep | 29709.m001222 | 832 | 93.9 | 95.8 | retinoblastoma-binding protein, putative |
| JAT_13201ests | --No_Hits-- | ||||
| KJC_r1 | KJC_c06895 | 1255 | 97.5 | 97.5 |
| JcCA0029371.20 | length: 424 aa. | |||
| IPR001680 | WD40 repeat | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| HMMSmart | SM00320 | no description | 0.00087 | 115-154 167-207 216-256 262-302 306-346 363-403 |
| IPR011046 | WD40 repeat-like-containing domain | |||
| superfamily | SSF50978 | WD40 | 2.1e-58 | 3-404 |
| IPR015943 | WD40/YVTN repeat-like-containing domain | |||
| Gene3D | G3DSA:2.130.10.10 | no description | 4.3e-53 | 115-402 |
| IPR017986 | WD40-repeat-containing domain | |||
| ProfileScan | PS50294 | WD_REPEATS_REGION | 28.265 | 174-412 |
| IPR019775 | WD40 repeat, conserved site | |||
| PatternScan | PS00678 | WD_REPEATS_1 | NA | 194-208 |
| IPR019781 | WD40 repeat, subgroup | |||
| HMMPfam | PF00400 | WD40 | 7.6e-05 | 172-207 220-256 264-302 309-346 366-402 |
| IPR019782 | WD40 repeat 2 | |||
| ProfileScan | PS50082 | WD_REPEATS_2 | 9.138 | 174-216 269-304 313-355 370-404 |
| IPR020472 | G-protein beta WD-40 repeat, region | |||
| FPrintScan | PR00320 | GPROTEINBRPT | 4.6e-06 | 194-208 289-303 390-404 |
| IPR022052 | Histone-binding protein RBBP4 | |||
| HMMPfam | PF12265 | CAF1C_H4-bd | 5.2e-30 | 18-88 |
| no_ID | ||||
| HMMPanther | PTHR22850 | WD40 | 3.2e-258 | 5-421 |
| HMMPanther | PTHR22850:SF27 | RETINOBLASTOMA-BINDING | 3.2e-258 | 5-421 |
| Seg | seg | seg | NA | 5-14 |