Jatropha Genome Database

JcCA0028701.10 (JcS_100234.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0028701
Scaffold:
JcS_100234 JcCA0296331(-) =JcCB0468081(+) =JcCA0028701(-) =JcCB0733251(-) =JcCA0152411(+) =JcCB0577931(+) =JcCA0145031(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9GSH4_POPTR 804 71.7 78.2 (tr|B9GSH4) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_552515 PE=4 SV=1
Arabidopsis_pep AT2G47440.1 649 57.9 69.1 | Symbols: | DNAJ heat shock N-terminal domain-containing protein | chr2:19469912-19471660 FORWARD
soybean_pep Glyma03g37700.1 740 64.7 73.3  
Medicago_pep IMGA|Medtr7g132780.1 711 63.6 73.5 Heat shock protein DnaJ, N-terminal; Tetratricopeptide-like helical chr07_pseudomolecule_IMGAG_V3 30858733-30855495 F EGN_Mt090430 20090702
grape_pep GSVIVT01028103001 779 68.4 74.3  
castor_bean_cds 30076.m004676 944 83.0 83.0 heat shock protein binding protein, putative
castor_bean_pep 30076.m004676 797 71.9 75.7 heat shock protein binding protein, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c03070 1289 99.3 99.3  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0028701.10 length: 578 aa.
IPR001440 Tetratricopeptide TPR-1
method AccNumber shortName E-value location
HMMPfam PF00515 TPR_1 7.1e-06 286-319
IPR001623 Heat shock protein DnaJ, N-terminal
Molecular Function GO:0031072 heat shock protein binding    
HMMPfam PF00226 DnaJ 1.3e-05 401-434
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005488 binding    
Gene3D G3DSA:1.25.40.10 no description 6.2e-11 244-352
IPR019734 Tetratricopeptide repeat
HMMSmart SM00028 no description 0.00016 286-319
no_ID  
Coil coil coiled-coil NA 480-501
HMMPanther PTHR22904 TPR 2.6e-291 41-569
HMMPanther PTHR22904:SF7 SGT-1-RELATED 2.6e-291 41-569
Seg seg seg NA 93-117
121-135
199-210
246-262
479-508
superfamily SSF48452 TPR-like 0.00055 250-352
38-190