Jatropha Genome Database

JcCA0028391.10 (JcS_103414.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0028391
Scaffold:
JcS_103414 JcCA0028391(-) =JcCB0890051(+) =JcCB0589371(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl D6BQN6_9ROSI 132 85.7 87.0 (tr|D6BQN6) Gamma-thionin PPT defensin 1-like protein OS=Jatropha curcas PE=4 SV=1
Arabidopsis_pep AT2G02100.1 95.9 61.0 66.2 | Symbols: LCR69, PDF2.2 | LCR69 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 69); peptidase inhibitor | chr2:528397-528885 FORWARD
soybean_pep Glyma16g18480.1 89.7 64.4 72.6  
Medicago_pep IMGA|AC229689_5.1 92.4 60.8 73.0 Gamma Purothionin AC229689.5 22893-23398 E EGN_Mt090430 20090702
grape_pep GSVIVT01010274001 112 72.7 75.3  
castor_bean_cds 29908.m006133 58.0 82.8 82.8 Low-molecular-weight cysteine-rich protein LCR69 precursor, putative
castor_bean_pep 29908.m006133 75.5 67.5 72.7 Low-molecular-weight cysteine-rich protein LCR69 precursor, putative
JAT_13201ests gi|237681014|gb|GO247650.1|GO247650 442 100.0 100.0 JcrME_RL1194 Expressed sequence tags from Jatropha curcas root cDNA library Jatropha curcas cDNA, mRNA sequence
KJC_r1 KJC_c01360 464 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0028391.10 length: 77 aa.
IPR003614 Knottin
method AccNumber shortName E-value location
Biological Process GO:0006952 defense response    
HMMSmart SM00505 no description 2.3e-11 32-77
IPR008176 Gamma thionin
Biological Process GO:0006952 defense response    
HMMPfam PF00304 Gamma-thionin 1.4e-17 31-77
PatternScan PS00940 GAMMA_THIONIN NA 31-54
IPR008177 Gamma Purothionin
Biological Process GO:0006952 defense response    
FPrintScan PR00288 PUROTHIONIN 1.8e-09 32-47
62-76
no_ID  
Gene3D G3DSA:3.30.30.10 no description 1.1e-15 31-77
Seg seg seg NA 11-19
superfamily SSF57095 Scorpion 3.1e-14 31-77