Jatropha Genome Database

JcCA0025111.30 (JcS_101188.60)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0025111
Scaffold:
JcS_101188 JcCB0362101(-) =JcCB0279751(-) =JcCB0269501(+) =JcCA0025111(+) =JcCB0740801(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl D1MFS7_HEVBR 159 57.3 65.0 (tr|D1MFS7) MADS-box transcription factor 2 OS=Hevea brasiliensis PE=2 SV=1
Arabidopsis_pep AT2G45660.1 105 43.2 56.8 | Symbols: AGL20, SOC1 | AGL20 (AGAMOUS-LIKE 20); transcription factor | chr2:18807799-18810193 REVERSE
soybean_pep Glyma18g45780.1 110 45.2 56.8  
Medicago_pep IMGA|Medtr7g083450.1 54.3 46.5 59.2 Transcription factor, K-box chr07_pseudomolecule_IMGAG_V3 17811872-17810220 F EGN_Mt090430 20090702
grape_pep GSVIVT01027579001 131 51.6 58.8  
castor_bean_cds 30174.m008936 266 83.6 83.6 mads box protein, putative
castor_bean_pep 30174.m008936 149 55.1 64.6 mads box protein, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c11682 650 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0025111.30 length: 157 aa.
IPR002487 Transcription factor, K-box
method AccNumber shortName E-value location
Molecular Function GO:0003700 transcription factor activity    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF01486 K-box 1.9e-24 15-109
ProfileScan PS51297 K_BOX 14.713 26-116
no_ID  
Coil coil coiled-coil NA 26-47
82-110
HMMPanther PTHR11945 MADS 1.4e-17 1-109
Seg seg seg NA 50-70
127-140