Jatropha Genome Database

JcCA0022221.20 (JcS_103177.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0022221
Scaffold:
JcS_103177 JcCA0022221(+) =JcCB0265951(+) =JcCB0095101(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SE41_RICCO 1098 63.5 76.3 (tr|B9SE41) Leucine-rich repeat receptor protein kinase EXS, putative OS=Ricinus communis GN=RCOM_1522470 PE=4 SV=1
Arabidopsis_pep AT2G34930.1 301 30.6 46.4 | Symbols: | disease resistance family protein | chr2:14737169-14739886 REVERSE
soybean_pep Glyma18g33170.1 305 31.3 47.7  
Medicago_pep IMGA|AC235674_16.1 288 29.3 42.9 Leucine-rich repeat AC235674.1 80526-84026 H EGN_Mt090430 20090702
grape_pep GSVIVT01029646001 377 31.6 48.5  
castor_bean_cds 30150.m000491 151 79.6 79.6 Leucine-rich repeat receptor protein kinase EXS precursor, putative
castor_bean_pep 30150.m000491 1098 63.5 76.3 Leucine-rich repeat receptor protein kinase EXS precursor, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0022221.20 length: 917 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.55 114-137
248-268
560-580
656-677
703-724
774-794
IPR003591 Leucine-rich repeat, typical subtype
HMMSmart SM00369 no description 31 112-137
271-295
388-412
436-459
558-582
605-629
701-723
724-748
772-796
861-885
IPR013210 Leucine-rich repeat-containing N-terminal domain, type 2
HMMPfam PF08263 LRRNT_2 4.4e-11 27-64
IPR020474 Toll-like receptor, leucine rich repeat-containing
FPrintScan PR00019 LEURICHRPT 2e-05 656-669
772-785
no_ID  
Gene3D G3DSA:3.80.10.10 no description 9.3e-31 23-313
317-499
514-719
720-900
HMMPanther PTHR23258 SERINE-THREONINE 7.8e-77 54-887
HMMPanther PTHR23258:SF462LRR RECEPTOR-LIKE 7.8e-77 54-887
Seg seg seg NA 292-308
442-453
superfamily SSF52047 RNI-like 7.4e-38 339-619
50-375
superfamily SSF52058 L 1.8e-48 610-913