| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | D7M9M0_ARALY | 118 | 68.6 | 83.7 | (tr|D7M9M0) Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_490820 PE=4 SV=1 |
| Arabidopsis_pep | AT4G37940.1 | 117 | 69.8 | 82.6 | | Symbols: AGL21 | AGL21; transcription factor | chr4:17835695-17838621 REVERSE |
| soybean_pep | Glyma01g02530.1 | 117 | 86.6 | 94.0 | |
| Medicago_pep | IMGA|Medtr5g032510.1 | 117 | 93.4 | 98.4 | Transcription factor, MADS-box chr05_pseudomolecule_IMGAG_V3 13173743-13172519 E EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01038474001 | 117 | 90.0 | 98.3 | |
| castor_bean_cds | 29596.m000699 | 81.8 | 81.4 | 81.4 | mads box protein, putative |
| castor_bean_pep | 29596.m000699 | 112 | 86.7 | 98.3 | mads box protein, putative |
| JAT_13201ests | --No_Hits-- | ||||
| KJC_r1 | --No_Hits-- |
| JcCA0022141.10 | length: 108 aa. | |||
| IPR002100 | Transcription factor, MADS-box | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003700 | transcription factor activity | ||
| Cellular Component | GO:0005634 | nucleus | ||
| Biological Process | GO:0006355 | regulation of transcription, DNA-dependent | ||
| Molecular Function | GO:0043565 | sequence-specific DNA binding | ||
| FPrintScan | PR00404 | MADSDOMAIN | 1.6e-28 | 3-23 23-38 38-59 |
| HMMPfam | PF00319 | SRF-TF | 3.9e-25 | 10-58 |
| HMMSmart | SM00432 | no description | 7e-38 | 1-60 |
| PatternScan | PS00350 | MADS_BOX_1 | NA | 3-57 |
| ProfileScan | PS50066 | MADS_BOX_2 | 31.048 | 1-61 |
| superfamily | SSF55455 | SRF-like | 1.3e-26 | 1-84 |
| no_ID | ||||
| HMMPanther | PTHR11945 | MADS | 2.6e-37 | 10-61 |
| HMMPanther | PTHR11945:SF19 | MADS | 2.6e-37 | 10-61 |