| JcS_105497 | JcCB0747201(-) =JcCA0020841(+) =JcCB0709681(-) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | B9GWI1_POPTR | 584 | 94.9 | 95.2 | (tr|B9GWI1) Tubulin, beta chain OS=Populus trichocarpa GN=TUB10 PE=3 SV=1 |
| Arabidopsis_pep | AT5G23860.1 | 572 | 91.8 | 93.9 | | Symbols: TUB8 | TUB8; structural constituent of cytoskeleton | chr5:8042962-8044528 FORWARD |
| soybean_pep | Glyma08g01740.1 | 577 | 92.9 | 95.2 | |
| Medicago_pep | IMGA|Medtr4g149480.1 | 573 | 92.5 | 94.6 | Cell division protein FtsZ chr04_pseudomolecule_IMGAG_V3 37171494-37175799 E EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01028941001 | 452 | 76.9 | 78.6 | |
| castor_bean_cds | 30190.m011215 | 1015 | 89.5 | 89.5 | tubulin beta chain, putative |
| castor_bean_pep | 30190.m011215 | 582 | 94.6 | 95.2 | tubulin beta chain, putative |
| JAT_13201ests | gi|268524654|gb|FM895352.1|FM895352 | 232 | 82.7 | 82.7 | FM895352 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002160, mRNA sequence |
| KJC_r1 | KJC_c12234 | 807 | 99.8 | 99.8 |
| JcCA0020841.30 | length: 311 aa. | |||
| IPR000217 | Tubulin | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0005525 | GTP binding | ||
| Cellular Component | GO:0005874 | microtubule | ||
| Biological Process | GO:0007017 | microtubule-based process | ||
| FPrintScan | PR01161 | TUBULIN | 4.2e-44 | 19-40 44-57 58-78 238-266 |
| HMMPanther | PTHR11588 | TUBULIN | 5.1e-242 | 1-311 |
| IPR002453 | Beta tubulin | |||
| Molecular Function | GO:0005198 | structural molecule activity | ||
| Molecular Function | GO:0005525 | GTP binding | ||
| Cellular Component | GO:0005874 | microtubule | ||
| Biological Process | GO:0007018 | microtubule-based movement | ||
| FPrintScan | PR01163 | BETATUBULIN | 6.4e-90 | 20-32 80-92 98-107 113-126 133-149 179-197 197-211 215-238 245-256 280-298 |
| HMMPanther | PTHR11588:SF9 | TUBULIN | 5.1e-242 | 1-311 |
| IPR003008 | Tubulin/FtsZ, GTPase domain | |||
| Cellular Component | GO:0043234 | protein complex | ||
| Biological Process | GO:0051258 | protein polymerization | ||
| Gene3D | G3DSA:3.40.50.1440 | no description | 1.6e-57 | 1-133 |
| HMMPfam | PF00091 | Tubulin | 2.6e-28 | 1-90 |
| IPR008280 | Tubulin/FtsZ, C-terminal | |||
| Molecular Function | GO:0003924 | GTPase activity | ||
| Molecular Function | GO:0005525 | GTP binding | ||
| Cellular Component | GO:0043234 | protein complex | ||
| Biological Process | GO:0051258 | protein polymerization | ||
| superfamily | SSF55307 | Tubulin | 1.2e-79 | 112-295 |
| IPR017975 | Tubulin, conserved site | |||
| Molecular Function | GO:0005525 | GTP binding | ||
| Cellular Component | GO:0005874 | microtubule | ||
| Biological Process | GO:0007017 | microtubule-based process | ||
| PatternScan | PS00227 | TUBULIN | NA | 8-14 |
| IPR018316 | Tubulin/FtsZ, 2-layer sandwich domain | |||
| Molecular Function | GO:0003924 | GTPase activity | ||
| Molecular Function | GO:0005525 | GTP binding | ||
| Cellular Component | GO:0043234 | protein complex | ||
| Biological Process | GO:0051258 | protein polymerization | ||
| Gene3D | G3DSA:3.30.1330.20 | no description | 4e-40 | 135-241 |
| HMMPfam | PF03953 | Tubulin_C | 4.7e-48 | 129-250 |
| HMMSmart | SM00865 | no description | 3.1e-40 | 114-251 |
| IPR019746 | Tubulin/FtsZ, N-terminal | |||
| superfamily | SSF52490 | Tubulin | 7.3e-48 | 1-111 |
| no_ID | ||||
| Coil | coil | coiled-coil | NA | 276-304 |
| Gene3D | G3DSA:1.10.287.600 | no description | 2.7e-23 | 242-298 |
| HMMSmart | SM00864 | no description | 2.3e-06 | 1-112 |
| Seg | seg | seg | NA | 6-19 295-311 |