Jatropha Genome Database

JcCA0020831.10 (JcS_109028.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0020831
Scaffold:
JcS_109028 JcCB0230371(-) =JcCA0020831(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9R8R1_RICCO 829 88.5 93.7 (tr|B9R8R1) Glucan endo-1,3-beta-glucosidase, putative OS=Ricinus communis GN=RCOM_1601700 PE=3 SV=1
Arabidopsis_pep AT4G29360.1 343 39.2 58.0 | Symbols: | glycosyl hydrolase family 17 protein | chr4:14451562-14453687 REVERSE
soybean_pep Glyma14g02350.1 351 41.6 60.2  
Medicago_pep IMGA|Medtr4g160090.1 340 40.6 59.6 Glycoside hydrolase, family 17; X8 chr04_pseudomolecule_IMGAG_V3 40505895-40509043 E EGN_Mt090430 20090702
grape_pep GSVIVT01013401001 769 81.7 88.9  
castor_bean_cds 30170.m013711 1207 86.4 86.4 Glucan endo-1,3-beta-glucosidase precursor, putative
castor_bean_pep 30170.m013711 829 88.5 93.7 Glucan endo-1,3-beta-glucosidase precursor, putative
JAT_13201ests gi|268520267|gb|FM890115.1|FM890115 801 99.1 99.1 FM890115 Jatropha curcas embryo 35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_003915, mRNA sequence
KJC_r1 KJC_c01982 1211 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0020831.10 length: 458 aa.
IPR000490 Glycoside hydrolase, family 17
method AccNumber shortName E-value location
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Biological Process GO:0005975 carbohydrate metabolic process    
HMMPfam PF00332 Glyco_hydro_17 5.7e-94 23-343
IPR012946 X8
HMMPfam PF07983 X8 2.5e-28 371-455
HMMSmart SM00768 no description 4.8e-41 370-455
IPR013781 Glycoside hydrolase, subgroup, catalytic core
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005975 carbohydrate metabolic process    
Molecular Function GO:0043169 cation binding    
Gene3D G3DSA:3.20.20.80 no description 2.2e-104 23-344
IPR017853 Glycoside hydrolase, catalytic core
superfamily SSF51445 (Trans)glycosidases 4.1e-99 23-344
no_ID  
Seg seg seg NA 4-14
162-175