Jatropha Genome Database

JcCA0020472.10 (JcS_100624.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0020472
Scaffold:
JcS_100624 JcCB0479101(+) =JcCA0020472(-) =JcCB0175201(-) =JcCA0225051(-) =JcCB0095251(+) =JcCA0020761(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RFF9_RICCO 608 74.2 82.5 (tr|B9RFF9) Kinesin heavy chain, putative OS=Ricinus communis GN=RCOM_1434220 PE=3 SV=1
Arabidopsis_pep AT2G47500.1 336 52.1 64.5 | Symbols: | ATP binding / microtubule motor | chr2:19493247-19497882 FORWARD
soybean_pep Glyma19g40120.1 404 54.7 66.4  
Medicago_pep IMGA|Medtr1g107720.1 376 57.9 69.8 Calponin-like actin-binding; Kinesin, motor region chr01_pseudomolecule_IMGAG_V3 22798145-22804211 E EGN_Mt090430 20090702
grape_pep GSVIVT01031197001 440 58.2 70.2  
castor_bean_cds 30128.m008877 733 83.9 83.9 kinesin heavy chain, putative
castor_bean_pep 30128.m008877 608 74.2 82.5 kinesin heavy chain, putative
JAT_13201ests gi|268524773|gb|FM895471.1|FM895471 739 100.0 100.0 FM895471 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002395, mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0020472.10 length: 438 aa.
IPR001752 Kinesin, motor domain
method AccNumber shortName E-value location
Molecular Function GO:0003777 microtubule motor activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0007018 microtubule-based movement    
FPrintScan PR00380 KINESINHEAVY 2.1e-17 42-60
91-112
Gene3D G3DSA:3.40.850.10 no description 8.6e-45 8-182
HMMPfam PF00225 Kinesin 7.6e-44 25-140
HMMSmart SM00129 no description 1.1e-15 2-149
ProfileScan PS50067 KINESIN_MOTOR_DOMAIN2 11.141 9-72
IPR019821 Kinesin, motor region, conserved site
Molecular Function GO:0003777 microtubule motor activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0007018 microtubule-based movement    
PatternScan PS00411 KINESIN_MOTOR_DOMAIN1 NA 41-52
no_ID  
Coil coil coiled-coil NA 148-176
HMMPanther PTHR16012 KINESIN 1.4e-99 22-351
HMMPanther PTHR16012:SF135KINESIN HEAVY 1.4e-99 22-351
Seg seg seg NA 398-417
superfamily SSF52540 P-loop 1.4e-49 3-141