Jatropha Genome Database

JcCA0012252.10 (JcS_100073.50)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0012252
Scaffold:
JcS_100073 JcCB0251321(-) =JcCA0288061(-) =JcCB0432331(+) =JcCB0229931(+) =JcCA0012252(-) =JcCB0687271(+) =JcCB0339751(-) =JcCB0763531(+) =JcCB0332961(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9S4R6_RICCO 541 90.8 93.0 (tr|B9S4R6) Histone acetyltransferase gcn5, putative OS=Ricinus communis GN=RCOM_0991560 PE=4 SV=1
Arabidopsis_pep AT3G54610.1 472 77.1 84.5 | Symbols: HAT1, GCN5, HAG1, HAC3, HAG01, BGT | GCN5; DNA binding / H3 histone acetyltransferase/ histone acetyltransferase | chr3:20213593-20217375 FORWARD
soybean_pep Glyma19g34340.1 504 84.9 89.1  
Medicago_pep IMGA|Medtr8g074500.1 432 73.5 83.3 GCN5-related N-acetyltransferase; Bromodomain chr08_pseudomolecule_IMGAG_V3 14821763-14823106 E EGN_Mt090430 20090702
grape_pep GSVIVT01000712001 466 70.2 76.9  
castor_bean_cds 29883.m001985 963 91.2 91.2 histone acetyltransferase gcn5, putative
castor_bean_pep 29883.m001985 541 90.8 93.0 histone acetyltransferase gcn5, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0012252.10 length: 270 aa.
IPR000182 GCN5-related N-acetyltransferase
method AccNumber shortName E-value location
Molecular Function GO:0008080 N-acetyltransferase activity    
Biological Process GO:0008152 metabolic process    
HMMPfam PF00583 Acetyltransf_1 2e-06 2-59
ProfileScan PS51186 GNAT 13.968 1-87
IPR001487 Bromodomain
FPrintScan PR00503 BROMODOMAIN 3.3e-11 191-204
205-221
240-259
Gene3D G3DSA:1.20.920.10 no description 3.6e-23 152-261
HMMPfam PF00439 Bromodomain 6e-20 182-251
HMMSmart SM00297 no description 6.7e-25 169-264
ProfileScan PS50014 BROMODOMAIN_2 18.336 188-250
superfamily SSF47370 Bromodomain 4.2e-25 150-250
IPR016181 Acyl-CoA N-acyltransferase
Gene3D G3DSA:3.40.630.30 no description 9.6e-37 1-92
superfamily SSF55729 Acyl-CoA 8e-22 1-94
no_ID  
HMMPanther PTHR22880 FALZ-RELATED 3.2e-130 1-250
HMMPanther PTHR22880:SF6 HISTONE 3.2e-130 1-250