Jatropha Genome Database

JcCA0008021.40 (JcS_105224.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0008021
Scaffold:
JcS_105224 JcCB0593501(-) =JcCA0008021(-) =JcCB0890211(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RBZ3_RICCO 310 87.9 93.3 (tr|B9RBZ3) Alpha-expansin 7, putative OS=Ricinus communis GN=RCOM_1682500 PE=3 SV=1
Arabidopsis_pep AT1G12560.1 210 62.0 68.7 | Symbols: ATEXPA7, EXP7, ATEXP7, ATHEXP ALPHA 1.26, EXPA7 | ATEXPA7 (ARABIDOPSIS THALIANA EXPANSIN A7) | chr1:4276557-4277693 FORWARD
soybean_pep Glyma01g42370.1 257 79.1 82.9  
Medicago_pep IMGA|Medtr5g011340.1 253 76.9 85.9 Expansin 45, endoglucanase-like chr05_pseudomolecule_IMGAG_V3 3056034-3054419 F EGN_Mt090430 20090702
grape_pep GSVIVT01019889001 263 75.3 83.7  
castor_bean_cds 30190.m011094 283 82.3 82.3 Alpha-expansin 7 precursor, putative
castor_bean_pep 30190.m011094 310 87.9 93.3 Alpha-expansin 7 precursor, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0008021.40 length: 188 aa.
IPR002963 Expansin
method AccNumber shortName E-value location
Biological Process GO:0009664 plant-type cell wall organization    
FPrintScan PR01226 EXPANSIN 2.7e-29 72-86
112-122
131-148
148-161
IPR005132 Rare lipoprotein A
HMMPfam PF03330 DPBB_1 8.7e-26 77-163
IPR007112 Expansin 45, endoglucanase-like
ProfileScan PS50842 EXPANSIN_EG45 26.760 60-173
IPR007118 Expansin/Lol pI
Cellular Component GO:0005576 extracellular region    
FPrintScan PR01225 EXPANSNFAMLY 6.3e-26 41-56
59-77
81-99
156-172
IPR009009 Barwin-related endoglucanase
superfamily SSF50685 Barwin-like 1.3e-38 26-165
IPR014734 Pollen allergen, N-terminal
Gene3D G3DSA:2.40.40.40 no description 1.6e-42 24-166
no_ID  
HMMSmart SM00837 no description 4.4e-47 77-163