| JcS_108091 | JcCA0007981(-) =JcCB0122521(+) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | A5BE46_VITVI | 1422 | 75.8 | 86.4 | (tr|A5BE46) Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VITISV_025855 PE=4 SV=1 |
| Arabidopsis_pep | AT4G23160.1 | 331 | 37.2 | 57.9 | | Symbols: | protein kinase family protein | chr4:12129485-12134086 FORWARD |
| soybean_pep | Glyma02g36930.1 | 1057 | 58.0 | 73.5 | |
| Medicago_pep | IMGA|Medtr4g080020.1 | 431 | 32.0 | 50.8 | Polynucleotidyl transferase, Ribonuclease H fold chr04_pseudomolecule_IMGAG_V3 16287611-16283185 H EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01014104001 | 392 | 55.6 | 69.8 | |
| castor_bean_cds | --No_Hits-- | ||||
| castor_bean_pep | --No_Hits-- | ||||
| JAT_13201ests | --No_Hits-- | ||||
| KJC_r1 | --No_Hits-- |
| JcCA0007981.30 | length: 880 aa. | |||
| IPR001584 | Integrase, catalytic core | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003677 | DNA binding | ||
| Biological Process | GO:0015074 | DNA integration | ||
| HMMPfam | PF00665 | rve | 4.1e-26 | 16-142 |
| ProfileScan | PS50994 | INTEGRASE | 21.149 | 13-188 |
| IPR012337 | Polynucleotidyl transferase, ribonuclease H fold | |||
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| superfamily | SSF53098 | Ribonuclease | 2.6e-36 | 9-188 |
| IPR013103 | Reverse transcriptase, RNA-dependent DNA polymerase | |||
| HMMPfam | PF07727 | RVT_2 | 4.9e-97 | 386-632 |
| no_ID | ||||
| Gene3D | G3DSA:3.30.420.10 | no description | 3.8e-17 | 36-177 |
| HMMPanther | PTHR11439 | GAG-POL-RELATED | 0 | 12-873 |
| Seg | seg | seg | NA | 305-318 812-821 |
| superfamily | SSF56672 | DNA/RNA | 1.3e-24 | 385-831 |