Jatropha Genome Database

JcCA0007981.20 (JcS_108091.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0007981
Scaffold:
JcS_108091 JcCA0007981(-) =JcCB0122521(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9S8V3_RICCO 466 79.4 86.1 (tr|B9S8V3) Origin recognition complex subunit, putative OS=Ricinus communis GN=RCOM_0836080 PE=4 SV=1
Arabidopsis_pep AT1G26840.1 349 62.1 74.0 | Symbols: ORC6, ATORC6 | ORC6 (ORIGIN RECOGNITION COMPLEX PROTEIN 6); DNA binding | chr1:9298822-9300603 FORWARD
soybean_pep Glyma02g11860.1 398 66.6 79.1  
Medicago_pep IMGA|Medtr5g041100.1 407 67.6 79.1 Origin recognition complex subunit 6 chr05_pseudomolecule_IMGAG_V3 17590856-17596514 E EGN_Mt090430 20090702
grape_pep GSVIVT01020002001 423 70.8 83.0  
castor_bean_cds 29813.m001474 751 85.8 85.8 Origin recognition complex subunit, putative
castor_bean_pep 29813.m001474 466 79.4 86.1 Origin recognition complex subunit, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0007981.20 length: 287 aa.
IPR008721 Origin recognition complex, subunit 6
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005664 nuclear origin of replication recognition complex    
Biological Process GO:0006260 DNA replication    
HMMPfam PF05460 ORC6 1.2e-18 3-92
IPR020529 Origin recognition complex, subunit 6, metazoa/plant
Cellular Component GO:0005664 nuclear origin of replication recognition complex    
Biological Process GO:0006260 DNA replication    
BlastProDom PD315657 Q5XWK2_SOLTU_Q5XWK2; 3e-64 6-151
no_ID  
HMMPanther PTHR13394 ORIGIN 1.9e-73 1-266
Seg seg seg NA 152-164
248-261