| JcS_102464 | JcCB0057861(-) =JcCA0006661(+) =JcCB0254351(+) =JcCB0582451(-) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | A5BJD2_VITVI | 1460 | 56.4 | 72.2 | (tr|A5BJD2) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020846 PE=4 SV=1 |
| Arabidopsis_pep | ATMG00860.1 | 84.0 | 32.4 | 52.1 | | Symbols: ORF158 | hypothetical protein | chrM:235916-236392 FORWARD |
| soybean_pep | Glyma06g40570.1 | 1620 | 61.5 | 75.6 | |
| Medicago_pep | IMGA|Medtr4g041210.1 | 376 | 32.2 | 50.3 | RNA-directed DNA polymerase (Reverse transcriptase); Peptidase aspartic, active site; Retrotransposon gag protein; Polynucleotidyl transferase, Ribonuclease H fold chr04_pseudomolecule_IMGAG_V3 9673679-9667953 H EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01018780001 | 219 | 39.7 | 58.2 | |
| castor_bean_cds | --No_Hits-- | ||||
| castor_bean_pep | 29674.m000206 | 199 | 37.7 | 60.4 | conserved hypothetical protein |
| JAT_13201ests | --No_Hits-- | ||||
| KJC_r1 | --No_Hits-- |
| JcCA0006661.10 | length: 1311 aa. | |||
| IPR000477 | RNA-directed DNA polymerase (reverse transcriptase) | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003723 | RNA binding | ||
| Molecular Function | GO:0003964 | RNA-directed DNA polymerase activity | ||
| Biological Process | GO:0006278 | RNA-dependent DNA replication | ||
| HMMPfam | PF00078 | RVT_1 | 1.2e-16 | 487-640 |
| IPR001584 | Integrase, catalytic core | |||
| Molecular Function | GO:0003677 | DNA binding | ||
| Biological Process | GO:0015074 | DNA integration | ||
| HMMPfam | PF00665 | rve | 6.4e-22 | 1010-1119 |
| ProfileScan | PS50994 | INTEGRASE | 22.770 | 996-1163 |
| IPR012337 | Polynucleotidyl transferase, ribonuclease H fold | |||
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| superfamily | SSF53098 | Ribonuclease | 1.7e-38 | 1000-1156 |
| IPR021109 | Peptidase aspartic | |||
| superfamily | SSF50630 | Acid | 2.3e-06 | 113-228 |
| no_ID | ||||
| Coil | coil | coiled-coil | NA | 1196-1217 |
| Gene3D | G3DSA:3.30.420.10 | no description | 1.5e-30 | 1008-1169 |
| Gene3D | G3DSA:3.30.70.270 | no description | 1.4e-15 | 476-642 |
| HMMPanther | PTHR10178 | GAG/POL/ENV | 0 | 21-1291 |
| HMMPanther | PTHR10178:SF14 | RETROVIRUS | 0 | 21-1291 |
| Seg | seg | seg | NA | 1-11 27-38 900-911 |
| superfamily | SSF56672 | DNA/RNA | 8.6e-154 | 406-845 |