| JcS_101353 | JcCB0728941(+) =JcCB0128761(-) =JcCA0151951(+) =JcCA0004811(-) =JcCB0340251(+) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | A5BKB9_VITVI | 918 | 48.7 | 62.3 | (tr|A5BKB9) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003621 PE=4 SV=1 |
| Arabidopsis_pep | AT4G23160.1 | 161 | 48.8 | 66.0 | | Symbols: | protein kinase family protein | chr4:12129485-12134086 FORWARD |
| soybean_pep | Glyma02g36930.1 | 864 | 45.2 | 62.5 | |
| Medicago_pep | IMGA|AC235009_2.1 | 251 | 27.2 | 44.7 | Retrotransposon gag protein; Polynucleotidyl transferase, Ribonuclease H fold AC235009.1 5302-2150 H EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01014104001 | 836 | 50.4 | 65.7 | |
| castor_bean_cds | --No_Hits-- | ||||
| castor_bean_pep | --No_Hits-- | ||||
| JAT_13201ests | --No_Hits-- | ||||
| KJC_r1 | --No_Hits-- |
| JcCA0004811.20 | length: 1342 aa. | |||
| IPR001584 | Integrase, catalytic core | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003677 | DNA binding | ||
| Biological Process | GO:0015074 | DNA integration | ||
| HMMPfam | PF00665 | rve | 1.4e-24 | 504-628 |
| ProfileScan | PS50994 | INTEGRASE | 20.267 | 494-674 |
| IPR001878 | Zinc finger, CCHC-type | |||
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| Molecular Function | GO:0008270 | zinc ion binding | ||
| HMMPfam | PF00098 | zf-CCHC | 0.00011 | 261-277 |
| HMMSmart | SM00343 | no description | 0.0051 | 261-277 |
| ProfileScan | PS50158 | ZF_CCHC | 9.949 | 261-277 |
| IPR012337 | Polynucleotidyl transferase, ribonuclease H fold | |||
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| superfamily | SSF53098 | Ribonuclease | 8.1e-37 | 497-674 |
| IPR013103 | Reverse transcriptase, RNA-dependent DNA polymerase | |||
| HMMPfam | PF07727 | RVT_2 | 5.3e-54 | 882-1007 |
| no_ID | ||||
| Gene3D | G3DSA:3.30.420.10 | no description | 3.5e-17 | 524-663 |
| HMMPanther | PTHR11439 | GAG-POL-RELATED | 1.2e-190 | 3-1007 |
| Seg | seg | seg | NA | 228-243 817-834 1047-1058 1198-1213 |
| superfamily | SSF56672 | DNA/RNA | 1.4e-09 | 881-1007 |