Jatropha Genome Database

JcCA0004001.10 (JcS_101091.50)  /TE
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0004001
Scaffold:
JcS_101091 JcCB0198061(-) =JcCA0136101(-) =JcCB0573121(-) =JcCB0337031(-) =JcCA0004001(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9S5J7_RICCO 70.9 43.4 61.4 (tr|B9S5J7) Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0977440 PE=4 SV=1
Arabidopsis_pep AT5G42905.1 46.6 38.1 58.7 | Symbols: | nucleic acid binding / ribonuclease H | chr5:17201414-17202323 REVERSE
soybean_pep Glyma13g29590.1 72.4 37.8 60.2  
Medicago_pep IMGA|Medtr2g037840.1 63.2 39.5 55.8 Ribonuclease H; En/Spm-like transposon proteins chr02_pseudomolecule_IMGAG_V3 10460834-10454483 E EGN_Mt090430 20090702
grape_pep --No_Hits--        
castor_bean_cds --No_Hits--        
castor_bean_pep 29869.m001168 70.9 43.4 61.4 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0004001.10 length: 116 aa.
IPR012337 Polynucleotidyl transferase, ribonuclease H fold
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
superfamily SSF53098 Ribonuclease 4.6e-06 2-74
IPR015706 RNA-directed DNA polymerase (reverse transcriptase), related
HMMPanther PTHR19446 REVERSE 3.2e-07 4-67
no_ID  
HMMPanther PTHR19446:SF97 NON-LTR 3.2e-07 4-67