Jatropha Genome Database

JcCA0003732.20 (JcS_100817.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0003732
Scaffold:
JcS_100817 JcCA0175521(-) =JcCB0433201(-) =JcCA0241471(-) =JcCA0292601(+) =JcCA0003732(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9GKK9_POPTR 408 72.2 80.3 (tr|B9GKK9) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_640520 PE=4 SV=1
Arabidopsis_pep AT4G20330.1 314 58.2 72.7 | Symbols: | transcription initiation factor-related | chr4:10982683-10984039 REVERSE
soybean_pep Glyma08g01510.1 369 65.8 77.6  
Medicago_pep IMGA|Medtr5g010780.2 355 65.5 74.4 transcription initiation factor-related, putative chr05_pseudomolecule_IMGAG_V3 2752859-2748183 E EGN_Mt090430 20090702
grape_pep GSVIVT01019802001 369 68.8 76.6  
castor_bean_cds 30190.m011168 392 83.8 83.8 Transcription initiation factor IIE subunit beta, putative
castor_bean_pep 30190.m011168 372 68.7 76.8 Transcription initiation factor IIE subunit beta, putative
JAT_13201ests gi|268523521|gb|FM893844.1|FM893844 87.7 89.3 89.3 FM893844 Jatropha curcas embryo 56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_004773, mRNA sequence
KJC_r1 KJC_c11743 224 87.1 87.1  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0003732.20 length: 273 aa.
no_ID  
method AccNumber shortName E-value location
HMMPanther PTHR12716 TRANSCRIPTION 4.9e-75 1-271
HMMPanther PTHR12716:SF8 GENERAL 4.9e-75 1-271
Seg seg seg NA 241-255