Jatropha Genome Database

JcCA0003701.10 (JcS_101396.20)  /TE
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0003701
Scaffold:
JcS_101396 JcCB0812861(-) =JcCA0003701(-) =JcCB0039521(-) =JcCB0004391(-) =JcCB0133481(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl A5BWZ4_VITVI 168 38.1 61.9 (tr|A5BWZ4) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006422 PE=4 SV=1
Arabidopsis_pep --No_Hits--        
soybean_pep Glyma0071s00200.1 139 35.0 56.8  
Medicago_pep IMGA|Medtr3g059250.1 71.2 28.4 48.9 Retrotransposon gag protein chr03_pseudomolecule_IMGAG_V3 13301930-13300773 H EGN_Mt090430 20090702
grape_pep --No_Hits--        
castor_bean_cds --No_Hits--        
castor_bean_pep 30065.m001158 104 50.0 75.0 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0003701.10 length: 227 aa.
IPR005162 Retrotransposon gag protein
method AccNumber shortName E-value location
HMMPfam PF03732 Retrotrans_gag 7.2e-10 104-186
no_ID  
Coil coil coiled-coil NA 18-46
HMMPanther PTHR10178 GAG/POL/ENV 5.5e-10 13-226
HMMPanther PTHR10178:SF10 GAG 5.5e-10 13-226