Jatropha Genome Database

JcCA0003212.30 (JcS_100319.70)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0003212
Scaffold:
JcS_100319 JcCB0495181(-) =JcCB0369881(+) =JcCB0569331(+) =JcCB0097471(+) =JcCB0538041(+) =JcCA0003212(+) =JcCB0234291(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RDB7_RICCO 284 85.5 92.1 (tr|B9RDB7) Leucine rich repeat receptor kinase, putative OS=Ricinus communis GN=RCOM_1611820 PE=4 SV=1
Arabidopsis_pep AT2G45340.1 221 70.6 84.3 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr2:18691739-18694466 FORWARD
soybean_pep Glyma10g32090.1 231 65.9 79.8  
Medicago_pep IMGA|Medtr7g029620.1 249 70.1 83.3 Protein kinase chr07_pseudomolecule_IMGAG_V3 7554485-7559540 E EGN_Mt090430 20090702
grape_pep GSVIVT01004912001 223 64.6 83.9  
castor_bean_cds 30174.m008873 406 86.1 86.1 leucine rich repeat receptor kinase, putative
castor_bean_pep 30174.m008873 284 85.5 92.1 leucine rich repeat receptor kinase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0003212.30 length: 174 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.14 135-157
IPR013210 Leucine-rich repeat-containing N-terminal domain, type 2
HMMPfam PF08263 LRRNT_2 2.2e-07 21-59
no_ID  
Gene3D G3DSA:3.80.10.10 no description 9.2e-34 15-174
HMMPanther PTHR23258 SERINE-THREONINE 2.9e-62 67-174
HMMPanther PTHR23258:SF85 LEUCINE 2.9e-62 67-174
superfamily SSF52058 L 8.1e-33 15-174