Jatropha Genome Database

JcCA0000041.50 (JcS_200001.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0000041
Scaffold:
JcS_200001 JcPR01BHB71(-) =JcCA0170351(-) =JcPR04G2FGI(-) =JcPR04J2HZ7(-) =JcCB0462781(+) =JcPR04IANHZ(-) =JcCA0000041(-) =JcCA0000051(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl C0LE85_9ROSI 332 90.8 90.8 (tr|C0LE85) Ycf4 OS=Jatropha curcas GN=ycf4 PE=3 SV=1
Arabidopsis_pep ATCG00520.1 295 79.9 83.2 | Symbols: YCF4 | Encodes a protein required for photosystem I assembly and stability. In cyanobacteria, loss of function mutation in this gene increases PSII/PSI ratio without any influence on photoautotrophic growth. | chrC:59772-60326 FORWARD
soybean_pep --No_Hits--        
Medicago_pep --No_Hits--        
grape_pep GSVIVT01030619001 146 86.0 89.5  
castor_bean_cds 30185.m000927 426 93.5 93.5 Photosystem I assembly protein ycf4, putative
castor_bean_pep 30185.m000927 189 80.7 84.0 Photosystem I assembly protein ycf4, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c00076 999 96.9 96.9  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0000041.50 length: 184 aa.
IPR003359 Photosystem I assembly protein Ycf4
method AccNumber shortName E-value location
Cellular Component GO:0009579 thylakoid    
Biological Process GO:0015979 photosynthesis    
Cellular Component GO:0016021 integral to membrane    
BlastProDom PD003698 PSI_Ycf4 0.0 11-181
HMMPfam PF02392 Ycf4 1.799999999999975E-79 5-182