Jatropha Genome Database

JcCA0000041.40 (JcS_200001.40)   /short
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0000041
Scaffold:
JcS_200001 JcPR01BHB71(-) =JcCA0170351(-) =JcPR04G2FGI(-) =JcPR04J2HZ7(-) =JcCB0462781(+) =JcPR04IANHZ(-) =JcCA0000041(-) =JcCA0000051(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl A4GYS1_POPTR 70.9 100.0 100.0 (tr|A4GYS1) PSI I protein OS=Populus trichocarpa GN=psaI PE=3 SV=1
Arabidopsis_pep ATCG00510.1 65.1 88.9 91.7 | Symbols: PSAI | Encodes subunit I of photosystem I. | chrC:59247-59360 FORWARD
soybean_pep --No_Hits--        
Medicago_pep --No_Hits--        
grape_pep GSVIVT01030618001 57.0 93.5 93.5  
castor_bean_cds --No_Hits--        
castor_bean_pep --No_Hits--        
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c00076 170 97.9 97.9  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0000041.40 length: 37 aa.
IPR001302 Photosystem I reaction centre, subunit VIII
method AccNumber shortName E-value location
Cellular Component GO:0009522 photosystem I    
Biological Process GO:0015979 photosynthesis    
BlastProDom PD003995 PSAI_CALFE_Q7YJW3; 8e-10 6-37
HAMAP MF_00431 PSAI_MF_00431 12.873 4-37
HMMPfam PF00796 PSI_8 7.9e-14 7-31
HMMTigr TIGR03052 PS_I_psaI: 5.8e-15 5-35
superfamily SSF81540 Subunit 2.6e-08 2-35