Jatropha Genome Database

JcSR000334f.10 (JcS_202625.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcSR000334f
Scaffold:
JcS_202625 JcSR000334f(-) =JcPR03DOI1M(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl A9PI66_POPTR 271 75.6 82.1 (tr|A9PI66) 1-aminocyclopropane-1-carboxylate OS=Populus trichocarpa GN=ACO3 PE=2 SV=1
Arabidopsis_pep AT1G05010.1 238 71.3 78.0 | Symbols: EFE, ACO4, EAT1 | EFE (ETHYLENE-FORMING ENZYME); 1-aminocyclopropane-1-carboxylate oxidase | chr1:1431419-1432695 REVERSE
soybean_pep Glyma14g05390.1 251 74.2 79.8  
Medicago_pep IMGA|Medtr3g105840.1 256 76.4 79.4 2OG-Fe(II) oxygenase chr03_pseudomolecule_IMGAG_V3 26571699-26569425 F EGN_Mt090430 20090702
grape_pep GSVIVT01030508001 257 70.3 73.6  
castor_bean_cds 27856.m000040 371 84.9 84.9 1-aminocyclopropane-1-carboxylate oxidase, putative
castor_bean_pep 49629.m000013 257 68.8 72.6 1-aminocyclopropane-1-carboxylate oxidase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c00700 1126 98.8 98.8  
A list of protein families, domains and functional sites (searches in InterPro)
JcSR000334f.10 length: 208 aa.
IPR005123 Oxoglutarate/iron-dependent oxygenase
method AccNumber shortName E-value location
Molecular Function GO:0016491 oxidoreductase activity    
HMMPfam PF03171 2OG-FeII_Oxy 5.2e-24 80-176
no_ID  
Coil coil coiled-coil NA 29-57
Gene3D G3DSA:2.60.120.330 no description 1.6e-58 25-198
HMMPanther PTHR10209 IRON/ASCORBATE-DEPENDENT 2e-127 26-206
HMMPanther PTHR10209:SF12 1-AMINOCYCLOPROPANE-1-CARBOXYLATE 2e-127 26-206
Seg seg seg NA 37-62
191-201
superfamily SSF51197 Clavaminate 6e-60 25-206