Jatropha Genome Database

JcCD0101804.10 (JcS_105812.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCD0101804
Scaffold:
JcS_105812 JcCD0101804(+) =JcCB0750271(+) =JcCA0051561(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl Q7DLP8_TOBAC 207 90.7 99.1 (tr|Q7DLP8) Proliferating cell nuclear antigen OS=Nicotiana tabacum GN=PCNA1 PE=2 SV=1
Arabidopsis_pep AT2G29570.1 206 90.7 98.1 | Symbols: PCNA2, ATPCNA2 | PCNA2 (PROLIFERATING CELL NUCLEAR ANTIGEN 2); DNA binding / DNA polymerase processivity factor | chr2:12650139-12651598 REVERSE
soybean_pep Glyma08g45120.1 206 88.8 99.1  
Medicago_pep --No_Hits--        
grape_pep GSVIVT01024815001 136 88.2 100.0  
castor_bean_cds 29751.m001805 133 80.3 80.3 proliferating cell nuclear antigen, putative
castor_bean_pep 29751.m001805 205 88.8 99.1 proliferating cell nuclear antigen, putative
JAT_13201ests gi|262091308|gb|GT228735.1|GT228735 624 99.7 99.7 JC300 Jatropha seeds from fruits at three stages of maturation Jatropha curcas cDNA clone PL06SE.C05.scf 5', mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCD0101804.10 length: 119 aa.
IPR000730 Proliferating cell nuclear antigen, PCNA
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006275 regulation of DNA replication    
Molecular Function GO:0030337 DNA polymerase processivity factor activity    
Cellular Component GO:0043626 PCNA complex    
FPrintScan PR00339 PCNACYCLIN 6.2e-35 10-29
34-52
56-80
HMMPanther PTHR11352 PROLIFERATING 2.1e-67 2-107
HMMPfam PF00705 PCNA_N 1.4e-54 1-108
PatternScan PS00293 PCNA_2 NA 61-79
PatternScan PS01251 PCNA_1 NA 34-57
no_ID  
Gene3D G3DSA:3.70.10.10 no description 5.5e-35 1-107
superfamily SSF55979 DNA 2e-38 1-107