Jatropha Genome Database

JcCD0077184.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCD0077184
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RM43_RICCO 193 78.8 91.2 (tr|B9RM43) Ornithine decarboxylase, putative OS=Ricinus communis GN=RCOM_1077630 PE=3 SV=1
Arabidopsis_pep --No_Hits--        
soybean_pep Glyma06g02290.1 159 64.0 82.5  
Medicago_pep IMGA|Medtr3g157420.1 156 66.1 81.7 Orn/DAP/Arg decarboxylase 2 chr03_pseudomolecule_IMGAG_V3 41516251-41514746 E EGN_Mt090430 20090702
grape_pep GSVIVT01015447001 175 69.6 84.8  
castor_bean_cds 29929.m004547 172 81.5 81.5 ornithine decarboxylase, putative
castor_bean_pep 29929.m004547 193 78.8 91.2 ornithine decarboxylase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCD0077184.10 length: 130 aa.
IPR000183 Orn/DAP/Arg decarboxylase 2
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
FPrintScan PR01179 ODADCRBXLASE 1.6e-08 36-54
56-68
HMMPfam PF02784 Orn_Arg_deC_N 9.5e-31 18-120
PatternScan PS00878 ODR_DC_2_1 NA 36-54
IPR002433 Ornithine decarboxylase
Biological Process GO:0006596 polyamine biosynthetic process    
FPrintScan PR01182 ORNDCRBXLASE 2.2e-34 8-32
34-61
78-102
no_ID  
Gene3D G3DSA:3.20.20.10 no description 5.4e-26 8-125
HMMPanther PTHR11482 ARGININE/DIAMINOPIMELATE/ORNITHINE 6.6e-48 2-114
HMMPanther PTHR11482:SF4 ORNITHINE 6.6e-48 2-114
superfamily SSF51419 PLP-binding 1.2e-27 14-123