Jatropha Genome Database

JcCD0051196.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCD0051196
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl Q9M7J0_9ROSI 149 90.9 96.1 (tr|Q9M7J0) Retinoblastoma-related protein 1 OS=Populus tremula x Populus tremuloides GN=RB1 PE=2 SV=1
Arabidopsis_pep AT3G12280.1 140 84.4 89.6 | Symbols: RBR1, RBR, RB, ATRBR1 | RBR1 (RETINOBLASTOMA-RELATED 1); transcription factor binding | chr3:3913671-3918433 REVERSE
soybean_pep Glyma13g26170.1 149 90.9 93.5  
Medicago_pep IMGA|Medtr8g043930.1 132 83.1 87.0 Cyclin-like chr08_pseudomolecule_IMGAG_V3 9647497-9639961 E EGN_Mt090430 20090702
grape_pep GSVIVT01035560001 140 84.2 93.4  
castor_bean_cds 30040.m000267 806 87.9 87.9 conserved hypothetical protein
castor_bean_pep 30040.m000267 154 94.8 96.1 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCD0051196.10 length: 301 aa.
IPR002720 Retinoblastoma-associated protein, A-box
method AccNumber shortName E-value location
HMMPfam PF01858 RB_A 2.9e-23 6-78
IPR011028 Cyclin-like
superfamily SSF47954 Cyclin-like 6.1e-19 1-77
IPR013763 Cyclin-related
Gene3D G3DSA:1.10.472.10 no description 3.8e-17 1-77
no_ID  
HMMPanther PTHR13742 RETINOBLASTOMA-ASSOCIATED 3.1e-71 1-256
HMMPanther PTHR13742:SF1 RETINOBLASTOMA-RELATED 3.1e-71 1-256