Jatropha Genome Database

JcCC0408522.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCC0408522
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl Q9M5G5_EUPES 433 90.0 95.2 (tr|Q9M5G5) Retinoblastoma-like protein (Fragment) OS=Euphorbia esula PE=2 SV=1
Arabidopsis_pep AT3G12280.1 413 87.5 91.4 | Symbols: RBR1, RBR, RB, ATRBR1 | RBR1 (RETINOBLASTOMA-RELATED 1); transcription factor binding | chr3:3913671-3918433 REVERSE
soybean_pep Glyma15g36890.1 406 87.1 91.8  
Medicago_pep IMGA|Medtr8g043930.1 406 86.7 92.7 Cyclin-like chr08_pseudomolecule_IMGAG_V3 9647497-9639961 E EGN_Mt090430 20090702
grape_pep GSVIVT01035560001 427 89.3 93.6  
castor_bean_cds 30040.m000267 735 88.5 88.5 conserved hypothetical protein
castor_bean_pep 30040.m000267 447 93.5 97.0 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCC0408522.10 length: 259 aa.
IPR002720 Retinoblastoma-associated protein, A-box
method AccNumber shortName E-value location
HMMPfam PF01858 RB_A 1.6e-44 1-101
IPR011028 Cyclin-like
superfamily SSF47954 Cyclin-like 2e-39 1-105
IPR013763 Cyclin-related
Gene3D G3DSA:1.10.472.10 no description 3.4e-37 1-117
no_ID  
HMMPanther PTHR13742 RETINOBLASTOMA-ASSOCIATED 1.4e-165 1-232
HMMPanther PTHR13742:SF1 RETINOBLASTOMA-RELATED 1.4e-165 1-232