Jatropha Genome Database

JcCC0063741.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCC0063741
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9S9Z3_RICCO 385 58.6 72.1 (tr|B9S9Z3) (+)-delta-cadinene synthase isozyme A, putative OS=Ricinus communis GN=RCOM_0179780 PE=4 SV=1
Arabidopsis_pep AT5G23960.1 214 38.2 55.5 | Symbols: ATTPS21, TPS21 | TPS21 (TERPENE SYNTHASE 21); (-)-E-beta-caryophyllene synthase/ alpha-humulene synthase | chr5:8092969-8095128 FORWARD
soybean_pep Glyma12g16990.1 270 44.1 61.0  
Medicago_pep IMGA|Medtr2g096260.1 260 42.6 60.7 Terpene synthase-like; Terpenoid synthase chr02_pseudomolecule_IMGAG_V3 22252163-22248799 H EGN_Mt090430 20090702
grape_pep GSVIVT01014569001 323 49.7 62.7  
castor_bean_cds 28166.m001038 172 78.8 78.8 (+)-delta-cadinene synthase isozyme A, putative
castor_bean_pep 28166.m001038 385 58.6 72.1 (+)-delta-cadinene synthase isozyme A, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCC0063741.10 length: 341 aa.
IPR001906 Terpene synthase-like
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016829 lyase activity    
HMMPfam PF01397 Terpene_synth 1.3e-53 25-195
IPR005630 Terpene synthase, metal-binding domain
Molecular Function GO:0000287 magnesium ion binding    
Molecular Function GO:0016829 lyase activity    
HMMPfam PF03936 Terpene_synth_C 9.3e-36 225-321
IPR008930 Terpenoid cylases/protein prenyltransferase alpha-alpha toroid
superfamily SSF48239 Terpenoid 5.2e-63 24-220
IPR008949 Terpenoid synthase
Gene3D G3DSA:1.10.600.10 no description 6.5e-33 236-321
superfamily SSF48576 Terpenoid 1.5e-47 221-321
no_ID  
Coil coil coiled-coil NA 42-63
Gene3D G3DSA:1.50.30.10 no description 4.3e-63 43-235
Seg seg seg NA 127-139
176-187