Jatropha Genome Database

JcCB0891141.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0891141
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9I5F8_POPTR 141 83.5 92.4 (tr|B9I5F8) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_823671 PE=4 SV=1
Arabidopsis_pep AT1G04240.1 125 76.2 85.0 | Symbols: SHY2, IAA3 | SHY2 (SHORT HYPOCOTYL 2); transcription factor | chr1:1128564-1129319 REVERSE
soybean_pep Glyma02g16090.2 119 75.0 83.8  
Medicago_pep IMGA|Medtr1g083410.1 118 72.2 82.3 AUX/IAA protein chr01_pseudomolecule_IMGAG_V3 16394826-16396206 E EGN_Mt090430 20090702
grape_pep GSVIVT01000720001 129 76.6 88.3  
castor_bean_cds 29598.m000461 218 87.6 87.6 Auxin-induced protein 22D, putative
castor_bean_pep 29598.m000461 137 80.5 91.5 Auxin-induced protein 22D, putative
JAT_13201ests gi|262090677|gb|GT229035.1|GT229035 54.0 88.2 88.2 JC600 Jatropha seeds from fruits at three stages of maturation Jatropha curcas cDNA clone PL13SE.D12.scf 5', mRNA sequence
KJC_r1 KJC_c08363 52.0 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0891141.10 length: 83 aa.
IPR011525 Aux/IAA-ARF-dimerisation
method AccNumber shortName E-value location
Molecular Function GO:0046983 protein dimerization activity    
ProfileScan PS50962 IAA_ARF 14.353 38-83
no_ID  
HMMPfam PF02309 AUX_IAA 2.7e-33 3-79