Jatropha Genome Database

JcCB0756221.10 (JcS_101369.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0756221
Scaffold:
JcS_101369 JcCB0756221(-) =JcCB0059061(-) =JcCB0453321(+) =JcCB0450851(-) =JcCB0005461(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9HKV7_POPTR 617 78.3 83.2 (tr|B9HKV7) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_766505 PE=3 SV=1
Arabidopsis_pep AT1G48520.1 340 84.6 94.1 | Symbols: GATB | GATB (GLU-ADT SUBUNIT B); carbon-nitrogen ligase, with glutamine as amido-N-donor / glutaminyl-tRNA synthase (glutamine-hydrolyzing)/ ligase | chr1:17940185-17942540 FORWARD
soybean_pep Glyma08g05190.1 347 88.2 95.2  
Medicago_pep IMGA|Medtr5g067700.1 333 83.7 91.6 GatB, central region chr05_pseudomolecule_IMGAG_V3 24040370-24047208 E EGN_Mt090430 20090702
grape_pep GSVIVT01027938001 330 83.9 93.5  
castor_bean_cds 30008.m000791 704 91.0 91.0 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, putative
castor_bean_pep 30008.m000791 616 79.6 82.7 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0756221.10 length: 382 aa.
IPR006075 Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, N-terminal
method AccNumber shortName E-value location
Biological Process GO:0006412 translation    
Molecular Function GO:0016874 ligase activity    
HMMPfam PF02934 GatB_N 7.2e-61 2-139
197-349
IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site
Biological Process GO:0006412 translation    
Molecular Function GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor    
PatternScan PS01234 GATB NA 200-214
IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E
Biological Process GO:0006412 translation    
Molecular Function GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor    
HMMPanther PTHR11659 GLUTAMYL-TRNA(GLN) 2.1e-133 9-381