Jatropha Genome Database

JcCB0750271.10 (JcS_105812.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0750271
Scaffold:
JcS_105812 JcCD0101804(+) =JcCB0750271(+) =JcCA0051561(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9S374_RICCO 165 76.9 84.6 (tr|B9S374) Proliferating cell nuclear antigen OS=Ricinus communis GN=RCOM_0731080 PE=3 SV=1
Arabidopsis_pep AT2G29570.1 157 74.0 85.6 | Symbols: PCNA2, ATPCNA2 | PCNA2 (PROLIFERATING CELL NUCLEAR ANTIGEN 2); DNA binding / DNA polymerase processivity factor | chr2:12650139-12651598 REVERSE
soybean_pep Glyma08g45120.1 158 74.0 86.5  
Medicago_pep --No_Hits--        
grape_pep GSVIVT01024815001 159 75.0 85.6  
castor_bean_cds 29751.m001805 276 89.1 89.1 proliferating cell nuclear antigen, putative
castor_bean_pep 29751.m001805 165 76.9 84.6 proliferating cell nuclear antigen, putative
JAT_13201ests gi|262091308|gb|GT228735.1|GT228735 262 100.0 100.0 JC300 Jatropha seeds from fruits at three stages of maturation Jatropha curcas cDNA clone PL06SE.C05.scf 5', mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0750271.10 length: 96 aa.
IPR000730 Proliferating cell nuclear antigen, PCNA
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006275 regulation of DNA replication    
Molecular Function GO:0030337 DNA polymerase processivity factor activity    
Cellular Component GO:0043626 PCNA complex    
FPrintScan PR00339 PCNACYCLIN 6.5e-11 3-25
88-96
HMMPanther PTHR11352 PROLIFERATING 9.9e-46 1-83
HMMPfam PF02747 PCNA_C 8.3e-30 20-84
no_ID  
Gene3D G3DSA:3.70.10.10 no description 2.7e-20 1-83
superfamily SSF55979 DNA 1.9e-17 20-83