Jatropha Genome Database

JcCB0747431.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0747431
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl A9T4T1_PHYPA 280 82.8 89.7 (tr|A9T4T1) Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_168056 PE=4 SV=1
Arabidopsis_pep AT1G03840.1 263 84.0 88.2 | Symbols: MGP | MGP (Magpie); nucleic acid binding / protein binding / transcription factor/ zinc ion binding | chr1:967596-970058 REVERSE
soybean_pep Glyma20g37900.1 280 89.0 91.0  
Medicago_pep IMGA|Medtr1g099650.1 278 87.8 89.8 Zinc finger, C2H2-type chr01_pseudomolecule_IMGAG_V3 20449956-20453836 E EGN_Mt090430 20090702
grape_pep GSVIVT01031112001 279 88.3 91.0  
castor_bean_cds 30128.m008805 468 88.5 88.5 nucleic acid binding protein, putative
castor_bean_pep 30128.m008805 280 89.7 91.0 nucleic acid binding protein, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c03168 131 84.7 84.7  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0747431.10 length: 204 aa.
IPR007087 Zinc finger, C2H2-type
method AccNumber shortName E-value location
Cellular Component GO:0005622 intracellular    
Molecular Function GO:0008270 zinc ion binding    
PatternScan PS00028 ZINC_FINGER_C2H2_1 NA 86-106
ProfileScan PS50157 ZINC_FINGER_C2H2_2 10.949 84-106
IPR015880 Zinc finger, C2H2-like
Cellular Component GO:0005622 intracellular    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00355 no description 1.5e+02 84-106
125-155
160-180
no_ID  
HMMPanther PTHR10593 SERINE/THREONINE-PROTEIN 6.4e-11 123-200
HMMPanther PTHR10593:SF10 UNCHARACTERIZED 6.4e-11 123-200
HMMPfam PF12171 zf-C2H2_jaz 2e-05 83-106
Seg seg seg NA 8-17
30-50
158-168
superfamily SSF57667 C2H2 3.9e-05 142-186
83-108