| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | B9GN39_POPTR | 109 | 94.5 | 100.0 | (tr|B9GN39) MADS9, AGL24 mads-box transcription factor OS=Populus trichocarpa GN=MADS9 PE=3 SV=1 |
| Arabidopsis_pep | AT4G24540.1 | 105 | 90.9 | 100.0 | | Symbols: AGL24 | AGL24 (AGAMOUS-LIKE 24); protein binding / protein heterodimerization/ protein homodimerization/ sequence-specific DNA binding / transcription factor | chr4:12671160-12673645 REVERSE |
| soybean_pep | Glyma06g10020.2 | 103 | 90.9 | 94.5 | |
| Medicago_pep | IMGA|Medtr5g075150.1 | 99.8 | 83.6 | 94.5 | Transcription factor, MADS-box chr05_pseudomolecule_IMGAG_V3 27322321-27325073 E EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01009171001 | 107 | 90.9 | 100.0 | |
| castor_bean_cds | 29838.m001690 | 115 | 85.2 | 85.2 | mads box protein, putative |
| castor_bean_pep | 29838.m001690 | 100 | 87.3 | 94.5 | mads box protein, putative |
| JAT_13201ests | gi|262091321|gb|GT228748.1|GT228748 | 56.0 | 83.0 | 83.0 | JC313 Jatropha seeds from fruits at three stages of maturation Jatropha curcas cDNA clone PL06SE.E07.scf 5', mRNA sequence |
| KJC_r1 | KJC_c08529 | 125 | 93.3 | 93.3 |
| JcCB0703071.10 | length: 55 aa. | |||
| IPR002100 | Transcription factor, MADS-box | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003700 | transcription factor activity | ||
| Cellular Component | GO:0005634 | nucleus | ||
| Biological Process | GO:0006355 | regulation of transcription, DNA-dependent | ||
| Molecular Function | GO:0043565 | sequence-specific DNA binding | ||
| FPrintScan | PR00404 | MADSDOMAIN | 8e-26 | 3-23 23-38 38-55 |
| HMMPfam | PF00319 | SRF-TF | 5.2e-25 | 9-54 |
| HMMSmart | SM00432 | no description | 4.7e-31 | 1-55 |
| ProfileScan | PS50066 | MADS_BOX_2 | 28.217 | 1-55 |
| superfamily | SSF55455 | SRF-like | 5.7e-24 | 1-55 |
| no_ID | ||||
| HMMPanther | PTHR11945 | MADS | 8.4e-33 | 10-55 |
| HMMPanther | PTHR11945:SF19 | MADS | 8.4e-33 | 10-55 |