Jatropha Genome Database

JcCB0684951.10 (JcS_100189.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0684951
Scaffold:
JcS_100189 JcCB0008321(-) =JcCB0587971(-) =JcCB0684951(+) =JcCB0103411(-) =JcCB0004801(-) =JcCB0123281(+) =JcCB0182741(-) =JcCA0070561(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl D7SH55_VITVI 239 85.4 89.1 (tr|D7SH55) Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00008621001 PE=4 SV=1
Arabidopsis_pep AT3G48780.1 228 81.8 87.6 | Symbols: ATSPT1, SPT1 | SPT1 (SERINE PALMITOYLTRANSFERASE 1); serine C-palmitoyltransferase | chr3:18089346-18092276 FORWARD
soybean_pep Glyma16g26210.1 232 80.6 89.2  
Medicago_pep --No_Hits--        
grape_pep GSVIVT01008621001 239 85.4 89.1  
castor_bean_cds 30131.m006861 478 89.9 89.9 serine palmitoyltransferase, putative
castor_bean_pep 30131.m006861 229 84.2 86.3 serine palmitoyltransferase, putative
JAT_13201ests gi|268524984|gb|FM896614.1|FM896614 315 100.0 100.0 FM896614 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003875, mRNA sequence
KJC_r1 KJC_c04354 787 99.8 99.8  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0684951.10 length: 139 aa.
IPR004839 Aminotransferase, class I/II
method AccNumber shortName E-value location
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0016769 transferase activity, transferring nitrogenous groups    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPfam PF00155 Aminotran_1_2 2.4e-10 14-134
IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.90.1150.10 no description 1.2e-23 13-135
IPR015424 Pyridoxal phosphate-dependent transferase, major domain
superfamily SSF53383 PLP-dependent 9.9e-21 1-135
no_ID  
HMMPanther PTHR13693 CLASS 4.5e-73 1-135
HMMPanther PTHR13693:SF3 SERINE 4.5e-73 1-135
Seg seg seg NA 99-110