Jatropha Genome Database

JcCB0590711.10 (JcS_103677.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0590711
Scaffold:
JcS_103677 JcCA0074011(-) =JcCB0590711(+) =JcCB0267821(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl Q9M5G5_EUPES 447 91.3 94.8 (tr|Q9M5G5) Retinoblastoma-like protein (Fragment) OS=Euphorbia esula PE=2 SV=1
Arabidopsis_pep AT3G12280.1 347 77.2 84.5 | Symbols: RBR1, RBR, RB, ATRBR1 | RBR1 (RETINOBLASTOMA-RELATED 1); transcription factor binding | chr3:3913671-3918433 REVERSE
soybean_pep Glyma13g26170.1 402 82.5 90.6  
Medicago_pep IMGA|Medtr8g043930.1 397 80.3 87.8 Cyclin-like chr08_pseudomolecule_IMGAG_V3 9647497-9639961 E EGN_Mt090430 20090702
grape_pep GSVIVT01035560001 397 83.2 90.5  
castor_bean_cds 30040.m000267 882 89.6 89.6 conserved hypothetical protein
castor_bean_pep 30040.m000267 462 93.9 96.1 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0590711.10 length: 256 aa.
IPR002719 Retinoblastoma-associated protein, B-box
method AccNumber shortName E-value location
HMMPfam PF01857 RB_B 2.2e-46 2-122
IPR011028 Cyclin-like
superfamily SSF47954 Cyclin-like 2.2e-53 1-163
IPR013763 Cyclin-related
Gene3D G3DSA:1.10.472.10 no description 2.3e-44 1-144
no_ID  
HMMPanther PTHR13742 RETINOBLASTOMA-ASSOCIATED 2.7e-146 1-233
HMMPanther PTHR13742:SF1 RETINOBLASTOMA-RELATED 2.7e-146 1-233
Seg seg seg NA 232-241