Jatropha Genome Database

JcCB0549071.10 (JcS_201957.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0549071
Scaffold:
JcS_201957 JcCB0333371(+) =JcCB0549071(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9T1J4_RICCO 328 88.2 96.5 (tr|B9T1J4) Acyl-CoA dehydrogenase, putative OS=Ricinus communis GN=RCOM_0186930 PE=3 SV=1
Arabidopsis_pep AT3G51840.1 303 80.6 91.2 | Symbols: ACX4, ATSCX, ATG6 | ACX4 (ACYL-COA OXIDASE 4); acyl-CoA oxidase/ oxidoreductase | chr3:19225653-19229008 REVERSE
soybean_pep Glyma03g07540.1 325 82.7 90.3  
Medicago_pep IMGA|Medtr4g081040.1 80.9 36.0 54.4 Acyl-CoA dehydrogenase, N-terminal; chr04_pseudomolecule_IMGAG_V3 16808110-16814069 E EGN_Mt090430 20090702
grape_pep GSVIVT01011175001 321 85.9 95.3  
castor_bean_cds 28176.m000270 519 88.3 88.3 acyl-CoA dehydrogenase, putative
castor_bean_pep 28176.m000270 328 88.2 96.5 acyl-CoA dehydrogenase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c02901 398 98.3 98.3  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0549071.10 length: 186 aa.
IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain
method AccNumber shortName E-value location
Molecular Function GO:0003995 acyl-CoA dehydrogenase activity    
Biological Process GO:0055114 oxidation reduction    
Gene3D G3DSA:2.40.110.10 no description 4.5e-14 109-169
HMMPfam PF02770 Acyl-CoA_dh_M 4.1e-18 110-160
IPR006092 Acyl-CoA dehydrogenase, N-terminal
Molecular Function GO:0003995 acyl-CoA dehydrogenase activity    
Biological Process GO:0055114 oxidation reduction    
HMMPfam PF02771 Acyl-CoA_dh_N 3.9e-19 2-104
IPR009100 Acyl-CoA dehydrogenase/oxidase
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors    
Biological Process GO:0055114 oxidation reduction    
superfamily SSF56645 Acyl-CoA 8.2e-44 1-159
IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors    
Molecular Function GO:0050660 FAD binding    
Biological Process GO:0055114 oxidation reduction    
Gene3D G3DSA:1.10.540.10 no description 2.6e-23 1-108
no_ID  
HMMPanther PTHR10909 ELECTRON 2.1e-51 64-159
HMMPanther PTHR10909:SF10 ACYL-COA 2.1e-51 64-159