Jatropha Genome Database

JcCB0546741.10 (JcS_110663.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0546741
Scaffold:
JcS_110663 JcCB0546741(-) =JcCD0118630(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl Q9AXN7_THLFG 769 70.6 82.2 (tr|Q9AXN7) Tyrosine/dopa decarboxylase OS=Thalictrum flavum subsp. glaucum GN=TYDC1 PE=2 SV=1
Arabidopsis_pep AT2G20340.1 589 53.6 71.9 | Symbols: | tyrosine decarboxylase, putative | chr2:8779804-8782490 FORWARD
soybean_pep Glyma07g06500.1 707 65.5 79.8  
Medicago_pep IMGA|Medtr7g064800.1 689 64.9 79.5 Pyridoxal-dependent decarboxylase; ; chr07_pseudomolecule_IMGAG_V3 13168638-13170280 E EGN_Mt090430 20090702
grape_pep GSVIVT01028441001 614 57.0 73.7  
castor_bean_cds 29950.m001181 75.8 94.0 94.0 aromatic amino acid decarboxylase, putative
castor_bean_pep 29637.m000726 610 56.5 73.4 aromatic amino acid decarboxylase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0546741.10 length: 516 aa.
IPR002129 Pyridoxal phosphate-dependent decarboxylase
method AccNumber shortName E-value location
Molecular Function GO:0016831 carboxy-lyase activity    
Biological Process GO:0019752 carboxylic acid metabolic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPanther PTHR11999 GROUP 1.5e-112 236-513
HMMPfam PF00282 Pyridoxal_deC 1.3e-147 59-432
IPR010977 Aromatic-L-amino-acid decarboxylase
Biological Process GO:0006519 cellular amino acid and derivative metabolic process    
Molecular Function GO:0016831 carboxy-lyase activity    
FPrintScan PR00800 YHDCRBOXLASE 8.8e-81 30-49
53-70
71-90
97-116
118-136
137-156
162-182
371-386
414-433
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 4e-90 106-398
IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.90.1150.10 no description 1.2e-31 399-513
IPR015424 Pyridoxal phosphate-dependent transferase, major domain
superfamily SSF53383 PLP-dependent 1.9e-140 25-514
IPR021115 Pyridoxal-phosphate binding site
PatternScan PS00392 DDC_GAD_HDC_YDC NA 315-336
no_ID  
Gene3D G3DSA:1.20.1340.10 no description 3.2e-32 25-105
HMMPanther PTHR11999:SF11 AROMATIC 1.5e-112 236-513
Seg seg seg NA 260-270