Jatropha Genome Database

JcCB0543221.10 (JcS_102574.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0543221
Scaffold:
JcS_102574 JcCB0711881(+) =JcCB0543221(-) =JcCB0453091(+) =JcCA0312091(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9S4D7_RICCO 279 91.2 95.2 (tr|B9S4D7) Superoxide dismutase OS=Ricinus communis GN=RCOM_0689650 PE=3 SV=1
Arabidopsis_pep AT3G10920.1 241 76.9 88.4 | Symbols: MSD1, MEE33, ATMSD1 | MSD1 (MANGANESE SUPEROXIDE DISMUTASE 1); metal ion binding / superoxide dismutase | chr3:3418015-3419581 FORWARD
soybean_pep Glyma06g14960.1 244 78.2 87.1  
Medicago_pep --No_Hits--        
grape_pep GSVIVT01024575001 217 71.2 84.2  
castor_bean_cds 29729.m002354 456 89.4 89.4 superoxide dismutase [mn], putative
castor_bean_pep 29729.m002354 279 91.2 95.2 superoxide dismutase [mn], putative
JAT_13201ests gi|268524432|gb|FM895112.1|FM895112 628 99.4 99.4 FM895112 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_001684, mRNA sequence
KJC_r1 KJC_c00635 864 99.5 99.5  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0543221.10 length: 149 aa.
IPR001189 Manganese/iron superoxide dismutase
method AccNumber shortName E-value location
Molecular Function GO:0004784 superoxide dismutase activity    
Biological Process GO:0006801 superoxide metabolic process    
Molecular Function GO:0046872 metal ion binding    
Biological Process GO:0055114 oxidation reduction    
FPrintScan PR01703 MNSODISMTASE 7.6e-18 8-19
29-42
68-81
124-132
HMMPIR PIRSF000349 Superoxide 1.1e-31 3-149
HMMPanther PTHR11404 SUPEROXIDE 3.2e-86 1-147
IPR019831 Manganese/iron superoxide dismutase, N-terminal
Molecular Function GO:0004784 superoxide dismutase activity    
Biological Process GO:0006801 superoxide metabolic process    
Molecular Function GO:0046872 metal ion binding    
Biological Process GO:0055114 oxidation reduction    
HMMPfam PF00081 Sod_Fe_N 1e-31 4-85
superfamily SSF46609 Fe,Mn 6.9e-33 3-86
IPR019832 Manganese/iron superoxide dismutase, C-terminal
Molecular Function GO:0004784 superoxide dismutase activity    
Biological Process GO:0006801 superoxide metabolic process    
Molecular Function GO:0046872 metal ion binding    
Biological Process GO:0055114 oxidation reduction    
HMMPfam PF02777 Sod_Fe_C 2.8e-13 95-147
superfamily SSF54719 Fe,Mn 1.2e-13 87-148
no_ID  
HMMPanther PTHR11404:SF5 SUPEROXIDE 3.2e-86 1-147