Jatropha Genome Database

JcCB0484021.10 (JcS_100017.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0484021
Scaffold:
JcS_100017 JcCB0444641(-) =JcCB0762541(-) =JcCB0421491(-) =JcCB0795211(+) =JcCA0305361(+) =JcCB0484021(-) =JcCB0353721(-) =JcCB0700081(-) =JcCB0155391(-) =JcCB0216421(-) =JcCD0049927(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9SXC3_RICCO 483 71.8 80.5 (tr|B9SXC3) Phospholipase d delta, putative OS=Ricinus communis GN=RCOM_0783110 PE=4 SV=1
Arabidopsis_pep AT4G35790.2 362 55.9 70.1 | Symbols: ATPLDDELTA, PLDDELTA | ATPLDDELTA; phospholipase D | chr4:16955774-16959875 REVERSE
soybean_pep Glyma11g08640.2 411 61.4 74.8  
Medicago_pep IMGA|Medtr5g023030.1 405 60.1 73.9 C2 chr05_pseudomolecule_IMGAG_V3 9013048-9022609 E EGN_Mt090430 20090702
grape_pep GSVIVT01005195001 404 59.7 73.6  
castor_bean_cds 29784.m000369 331 81.0 81.0 phospholipase d delta, putative
castor_bean_pep 29784.m000369 483 71.8 80.5 phospholipase d delta, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c03844 1786 99.5 99.5  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0484021.10 length: 354 aa.
IPR000008 C2 calcium-dependent membrane targeting
method AccNumber shortName E-value location
HMMPfam PF00168 C2 1.4e-20 19-141
HMMSmart SM00239 no description 4.1e-14 18-157
IPR008973 C2 calcium/lipid-binding domain, CaLB
superfamily SSF49562 C2 9.3e-25 16-186
IPR015679 Phospholipase D
HMMPanther PTHR18896 PHOSPHOLIPASE 3.8e-128 69-314
IPR018029 C2 membrane targeting protein
ProfileScan PS50004 C2 9.776 19-142
no_ID  
Gene3D G3DSA:2.60.40.150 no description 5.8e-14 15-162
HMMPanther PTHR18896:SF13 PHOSPHOLIPASE 3.8e-128 69-314
Seg seg seg NA 50-70
159-170