Jatropha Genome Database

JcCB0456051.10 (JcS_200113.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0456051
Scaffold:
JcS_200113 JcCD0135823(-) =JcCD0179904(+) =JcPR03AIW3S(+) =JcCB0456051(+) =JcCB0480341(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl O81161_CARPA 273 82.3 88.4 (tr|O81161) Arginine decarboxylase (Fragment) OS=Carica papaya GN=spe2 PE=3 SV=1
Arabidopsis_pep AT4G34710.2 264 77.4 87.8 | Symbols: ADC2, SPE2, ATADC2 | ADC2 (ARGININE DECARBOXYLASE 2); arginine decarboxylase | chr4:16560315-16562450 REVERSE
soybean_pep Glyma04g00960.1 266 81.1 86.0  
Medicago_pep IMGA|Medtr4g097390.1 259 79.3 86.0 Arginine decarboxylase chr04_pseudomolecule_IMGAG_V3 20836174-20833237 E EGN_Mt090430 20090702
grape_pep GSVIVT01024167001 174 85.9 92.9  
castor_bean_cds 30131.m007139 379 82.9 82.9 arginine decarboxylase, putative
castor_bean_pep 30131.m007139 253 82.9 87.8 arginine decarboxylase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c00206 1267 99.4 99.4  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0456051.10 length: 217 aa.
IPR000183 Orn/DAP/Arg decarboxylase 2
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
HMMPfam PF02784 Orn_Arg_deC_N 2.7e-33 25-193
IPR002985 Arginine decarboxylase
Biological Process GO:0006527 arginine catabolic process    
Biological Process GO:0008295 spermidine biosynthetic process    
Molecular Function GO:0008792 arginine decarboxylase activity    
FPrintScan PR01180 ARGDCRBXLASE 2.7e-33 56-71
82-103
106-128
HMMPanther PTHR11482:SF3 ARGININE 2.5e-108 28-193
no_ID  
Gene3D G3DSA:3.20.20.10 no description 3.2e-24 28-193
HMMPanther PTHR11482 ARGININE/DIAMINOPIMELATE/ORNITHINE 2.5e-108 28-193
Seg seg seg NA 80-94
superfamily SSF51419 PLP-binding 4e-32 25-193