Jatropha Genome Database

JcCB0454241.10 (JcS_100864.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0454241
Scaffold:
JcS_100864 JcCA0247261(-) =JcCA0068421(-) =JcCB0454241(+) =JcCA0151971(+) =JcCD0155669(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RCC8_RICCO 692 88.6 92.7 (tr|B9RCC8) UDP-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase, putative OS=Ricinus communis GN=RCOM_1687000 PE=3 SV=1
Arabidopsis_pep AT1G63680.1 583 76.4 87.8 | Symbols: ATMURE, PDE316, MURE | MURE; ATP binding / acid-amino acid ligase/ ligase | chr1:23614461-23617247 FORWARD
soybean_pep Glyma05g37740.1 579 77.1 86.2  
Medicago_pep --No_Hits--        
grape_pep GSVIVT01019746001 300 64.0 69.6  
castor_bean_cds 30190.m011226 1273 88.9 88.9 UDP-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase, putative
castor_bean_pep 30190.m011226 692 88.6 92.7 UDP-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c07958 1667 99.1 99.1  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0454241.10 length: 408 aa.
IPR000713 Mur ligase, N-terminal
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0009058 biosynthetic process    
HMMPfam PF01225 Mur_ligase 3.2e-14 24-101
IPR004101 Mur ligase, C-terminal
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0016874 ligase activity    
Gene3D G3DSA:3.90.190.20 no description 0.00024 344-382
HMMPfam PF02875 Mur_ligase_C 2.2e-06 339-381
superfamily SSF53244 MurD-like 3.1e-10 339-381
IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0008360 regulation of cell shape    
Biological Process GO:0009252 peptidoglycan biosynthetic process    
Biological Process GO:0009273 peptidoglycan-based cell wall biogenesis    
Molecular Function GO:0016881 acid-amino acid ligase activity    
Biological Process GO:0051301 cell division    
HMMTigr TIGR01085 murE: 9.6e-64 22-406
IPR013221 Mur ligase, central
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0009058 biosynthetic process    
Gene3D G3DSA:3.40.1190.10 no description 2.1e-61 104-342
HMMPfam PF08245 Mur_ligase_M 1.4e-39 113-318
superfamily SSF53623 MurD-like 1.2e-54 104-338
no_ID  
Gene3D G3DSA:3.40.1390.10 no description 6.2e-15 22-103
HMMPanther PTHR23135 MUR 1.1e-95 113-382
HMMPanther PTHR23135:SF4 UDP-N-ACETYLMURAMOYLALANYL-D-GLUTAMATE--2,6-DIAMINOPIMELATE 1.1e-95 113-382
Seg seg seg NA 314-324
superfamily SSF63418 MurE/MurF 4.7e-23 1-103