Jatropha Genome Database

JcCB0429441.10 (JcS_100433.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0429441
Scaffold:
JcS_100433 JcCA0267531(-) =JcCB0429441(+) =JcCD0128967(-) =JcCB0064191(+) =JcCB0517161(+) =JcCB0284631(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl Q93ZX1_ARATH 140 89.7 95.6 (tr|Q93ZX1) At1g21690 OS=Arabidopsis thaliana GN=At1g21690/F8K7.11 PE=2 SV=1
Arabidopsis_pep AT1G21690.1 140 89.7 95.6 | Symbols: emb1968 | emb1968 (embryo defective 1968); ATP binding / ATPase/ DNA binding / DNA clamp loader/ nucleoside-triphosphatase/ nucleotide binding | chr1:7615675-7618362 FORWARD
soybean_pep Glyma06g12210.1 138 88.2 95.6  
Medicago_pep IMGA|Medtr3g100710.1 134 86.8 95.6 AAA ATPase, central region chr03_pseudomolecule_IMGAG_V3 24169522-24164910 E EGN_Mt090430 20090702
grape_pep GSVIVT01008825001 135 88.2 95.6  
castor_bean_cds 29648.m002000 172 85.7 85.7 replication factor C / DNA polymerase III gamma-tau subunit, putative
castor_bean_pep 29648.m002000 135 88.2 95.6 replication factor C / DNA polymerase III gamma-tau subunit, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c02320 383 99.5 99.5  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0429441.10 length: 73 aa.
IPR008824 DNA helicase, Holliday junction RuvB type, N-terminal
method AccNumber shortName E-value location
Biological Process GO:0006281 DNA repair    
Biological Process GO:0006310 DNA recombination    
Molecular Function GO:0009378 four-way junction helicase activity    
HMMPfam PF05496 RuvB_N 1.7e-07 12-66
no_ID  
Gene3D G3DSA:3.40.50.300 no description 1.4e-19 8-68
HMMPanther PTHR13779 HOLLIDAY 2.7e-08 19-73
superfamily SSF52540 P-loop 7e-19 8-73