Jatropha Genome Database

JcCB0423521.10 (JcS_100103.80)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0423521
Scaffold:
JcS_100103 JcCB0899951(-) =JcCA0238091(-) =JcCA0138821(+) =JcCB0499871(-) =JcCA0141021(-) =JcCA0265291(-) =JcCB0423521(+) =JcCD0091987(+) =JcCA0237721(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9STC9_RICCO 296 97.3 99.3 (tr|B9STC9) Triosephosphate isomerase OS=Ricinus communis GN=RCOM_0660930 PE=3 SV=1
Arabidopsis_pep AT2G21170.2 278 92.6 95.9 | Symbols: TIM | TIM (TRIOSEPHOSPHATE ISOMERASE); catalytic/ triose-phosphate isomerase | chr2:9071047-9073106 REVERSE
soybean_pep Glyma19g36990.1 286 95.3 97.3  
Medicago_pep --No_Hits--        
grape_pep GSVIVT01024086001 274 89.9 95.3  
castor_bean_cds 29711.m000323 579 91.4 91.4 triosephosphate isomerase, putative
castor_bean_pep 29711.m000323 296 97.3 99.3 triosephosphate isomerase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c02034 864 99.8 99.8  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0423521.10 length: 148 aa.
IPR000652 Triosephosphate isomerase
method AccNumber shortName E-value location
Molecular Function GO:0004807 triose-phosphate isomerase activity    
Biological Process GO:0008152 metabolic process    
HMMPanther PTHR21139 TRIOSEPHOSPHATE 4.5e-88 1-142
HMMPfam PF00121 TIM 1.2e-50 2-138
ProfileScan PS51440 TIM_2 49.469 1-140
superfamily SSF51351 Triosephosphate 3.2e-56 1-141
IPR013785 Aldolase-type TIM barrel
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.20.20.70 no description 1.4e-49 1-141
IPR020861 Triosephosphate isomerase, active site
PatternScan PS00171 TIM_1 NA 56-66