Jatropha Genome Database

JcCB0399791.10 (JcS_104647.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0399791
Scaffold:
JcS_104647 JcCB0362891(-) =JcCA0305801(-) =JcCB0399791(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RU97_RICCO 904 93.0 95.9 (tr|B9RU97) Auxin efflux carrier component, putative OS=Ricinus communis GN=RCOM_1636490 PE=4 SV=1
Arabidopsis_pep AT1G73590.1 575 62.9 71.6 | Symbols: PIN1, ATPIN1 | PIN1 (PIN-FORMED 1); transporter | chr1:27659772-27662876 FORWARD
soybean_pep Glyma19g30900.1 767 82.6 87.5  
Medicago_pep IMGA|Medtr7g106430.1 800 84.5 89.4 Auxin Efflux Carrier chr07_pseudomolecule_IMGAG_V3 24603006-24605708 E EGN_Mt090430 20090702
grape_pep GSVIVT01025748001 780 82.0 85.8  
castor_bean_cds 30180.m001064 1540 88.7 88.7 Auxin efflux carrier component, putative
castor_bean_pep 30180.m001064 904 93.0 95.9 Auxin efflux carrier component, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c03298 1195 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0399791.10 length: 494 aa.
IPR004776 Auxin efflux carrier
method AccNumber shortName E-value location
Cellular Component GO:0016021 integral to membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF03547 Mem_trans 1.4e-129 1-475
IPR014024 Auxin efflux carrier, subgroup
HMMTigr TIGR00946 2a69: 9.3e-178 1-482