Jatropha Genome Database

JcCB0399111.10 (JcS_105983.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0399111
Scaffold:
JcS_105983 JcCD0199913(-) =JcCB0399111(+) =JcCB0288331(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RUP9_RICCO 152 87.9 92.3 (tr|B9RUP9) Transcription regulator, putative OS=Ricinus communis GN=RCOM_0855340 PE=4 SV=1
Arabidopsis_pep AT3G28857.1 136 73.9 90.2 | Symbols: | transcription regulator | chr3:10855781-10856313 REVERSE
soybean_pep Glyma19g02510.1 152 86.7 94.4  
Medicago_pep IMGA|Medtr5g040160.1 115 71.4 89.6 Helix-loop-helix DNA-binding chr05_pseudomolecule_IMGAG_V3 17108849-17107589 F EGN_Mt090430 20090702
grape_pep GSVIVT01011380001 134 89.3 98.7  
castor_bean_cds 29822.m003497 260 88.5 88.5 transcription regulator, putative
castor_bean_pep 29822.m003497 152 87.9 92.3 transcription regulator, putative
JAT_13201ests gi|262091266|gb|GT228693.1|GT228693 163 100.0 100.0 JC258 Jatropha seeds from fruits at three stages of maturation Jatropha curcas cDNA clone PL05SE.C07.scf 5', mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0399111.10 length: 91 aa.
IPR001092 Helix-loop-helix DNA-binding domain
method AccNumber shortName E-value location
Molecular Function GO:0030528 transcription regulator activity    
Biological Process GO:0045449 regulation of transcription    
HMMPfam PF00010 HLH 1.1e-05 20-58
ProfileScan PS50888 HLH 9.593 4-59
IPR011598 Helix-loop-helix DNA-binding
Cellular Component GO:0005634 nucleus    
Molecular Function GO:0030528 transcription regulator activity    
Biological Process GO:0045449 regulation of transcription    
superfamily SSF47459 HLH, 2.7e-06 2-91
no_ID  
Coil coil coiled-coil NA 55-76