Jatropha Genome Database

JcCB0398801.10 (JcS_202195.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0398801
Scaffold:
JcS_202195 JcCB0569561(-) =JcCB0398801(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SZ69_RICCO 177 58.2 61.4 (tr|B9SZ69) Auxin-responsive protein IAA16, putative OS=Ricinus communis GN=RCOM_0484470 PE=4 SV=1
Arabidopsis_pep AT3G04730.1 144 56.9 66.0 | Symbols: IAA16 | IAA16; transcription factor | chr3:1288993-1290415 REVERSE
soybean_pep Glyma10g32340.1 153 63.3 71.1  
Medicago_pep IMGA|Medtr1g117600.1 146 58.6 69.5 AUX/IAA protein chr01_pseudomolecule_IMGAG_V3 25280071-25283234 E EGN_Mt090430 20090702
grape_pep GSVIVT01018101001 157 61.2 70.1  
castor_bean_cds 29598.m000460 159 88.9 88.9 Auxin-responsive protein IAA16, putative
castor_bean_pep 29598.m000460 177 58.2 61.4 Auxin-responsive protein IAA16, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c00598 1025 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0398801.10 length: 172 aa.
IPR011525 Aux/IAA-ARF-dimerisation
method AccNumber shortName E-value location
Molecular Function GO:0046983 protein dimerization activity    
ProfileScan PS50962 IAA_ARF 14.119 131-172
no_ID  
HMMPfam PF02309 AUX_IAA 1.8e-47 11-172
Seg seg seg NA 14-37
63-74
119-131