Jatropha Genome Database

JcCB0395821.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0395821
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SIG1_RICCO 129 29.7 46.4 (tr|B9SIG1) Ubiquitin-protein ligase, putative OS=Ricinus communis GN=RCOM_1255970 PE=4 SV=1
Arabidopsis_pep AT4G12560.2 120 29.2 47.5 | Symbols: | F-box family protein | chr4:7441815-7443157 FORWARD
soybean_pep Glyma15g10860.1 113 27.3 45.2  
Medicago_pep IMGA|Medtr2g029930.1 113 27.6 45.0 Cyclin-like F-box; F-box protein interaction domain chr02_pseudomolecule_IMGAG_V3 8146117-8151265 E EGN_Mt090430 20090702
grape_pep GSVIVT01026027001 112 27.5 42.1  
castor_bean_cds --No_Hits--        
castor_bean_pep 30027.m000838 129 29.7 46.4 ubiquitin-protein ligase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0395821.10 length: 366 aa.
IPR001810 Cyclin-like F-box
method AccNumber shortName E-value location
HMMSmart SM00256 no description 0.00085 5-45
IPR017451 F-box associated interaction domain
HMMTigr TIGR01640 F_box_assoc_1: 1e-09 120-338
no_ID  
Seg seg seg NA 237-249